| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4956 |
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| Symbol | |
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| ID | 3370508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5873877 |
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| End bp | 5875709 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637655325 |
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| Product | hypothetical protein |
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| Protein accession | YP_238021 |
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| Protein GI | 66048180 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG ATCTGCTGCC CTATTACGAG AAGGAACTCT CGCACCTGCG CTTTCTGGGC
CAGGAATTTG CCGCTCAATA TCCGAAGATC GCTTCGCGAC TGCTGATTGA GGGCGACAAC
TGCGAGGACC CGCACACCGA GCGCCTGATC GAGGCGTTCT CGTTCCTGTC GGCTCGCGTG
CACAAGAAAC TCGATGATGA GTTTCCGGAA ATCGTCGAGT CGTTCCTCGA GGTGCTGTAC
CCGCATTACT TGCGCCCTAC CCCGTCGATG TCCATCGTCG AGTTCAACAT GGGCAAGCAG
GAAAAGGTCA CCGAGTCCTA TCGTGTGGCG CGACACACCG AACTGCACGC CAATCCGGTG
GACGGCATCG TGTGCAAGTT CCGGACGTGC TACCCGGTCG AGCTATGGCC GATTGCCGTG
CAGAGCGCGT CGTTCATCGA AATGGAACGC TCGGCGTTCA ACGGCCACAG CGCAGACCTG
ATTGCACGTC TGCGCATTGG TCTGACGGCC ACCTCCGACG TGCTGTTCGG CAAGATGGAA
ATGGACAGCC TGCGCTTTTT CCTCGATGGC GAAAGCACGC TCATGCATCA ACTGTATGAG
CTGCTGTTCA ACAACCTGGC CAAGGCCACG CTGTCCTTCG AAGACGAAGG CCGCACTCGC
GAAGTGGTGC TGCCCGCCGG CGCCTTGAAG TCTGTCGGTT ACGGTCTGGA TGAAGGGCTG
GTGGATTACT CGGAGCGTTC GTTTCTCGGT TATCGGTTGC TGCACGAGTA CTTCACCTTC
CCGGACAAGT TCATGTTCTT CGACCTGTCG GGCTTTGCGC GCATTCTGGC GGGCAAAGAG
ATCGGCAAAG TGGAGATCAA TTTCTACTTT TCCGACTACG ACCTGACGGA CCGTCTGGCG
CGCCTGACGC AGAACGTCAG CCGCAACAAT TTCAAGCTCA ACTGCACGCC GATCATCAAC
CTGTTCCGCC AGCAGGCCGA GCCGATCAAG CTGACCCACG TCCAGCATGA ATACGCTGTC
ACGCCGGATG TGCGCCTGCA AAGCTCCGCC GAAGTGGTCT CGATCGATCG CGTGCGCCGG
GTCAAGAAGA TCAATGGCAA CGACCAGGTC GGCACCTGCC ATCCGTTCTT CGAACCACGC
GGCGATCAAG GCCCGGGACA GAGTTTCTGG ATCGCCCGGC GCCGGCCGAC GCAGAGCCGG
CAAAGTGACG GCTCAAACAT GTTCATCCGG GTCGTGGATC GGGATCTGGA GCTGATCGAT
TCCAACAATG ACACGCTCAG TATCCGTCTG ACGTGCAGCA ATCGCGACCT GCCATTGATG
CTGCCTTTTG GCGGCGAGCG CGGCGATTTC AACATTCCGT CGAACTCAGT GATCAAGGAC
ATCCGCTGCC TGCGCAAGCC TACGGCGACG GTGCGCGTGC CGCTGGGCAA CGGCGTGATC
TGGCGGCTTA TTTCGCACCT GTCACTCAAC CACATGTCGC TGGTTTCCAA GGGACGCGAG
GTGCTGCTGG AACTGCTGTC GCTTTACAAC TACCGCAACG TGTCGGCGAT CCGCAAACAG
ATCAACGGGA TCGTTTCGGT GAGCAGCGAG CCGGTCGTGG CACGCATCGG CCATCCGCGG
CCGAACTTCG TGCGCGGCGT CGGCATCACG CTGAAGTTCG ATGAAAGCCA GTACACCGGC
AGTGGCGTGT TCCTGTTCGG CATGGTGCTT GATCACTTCT TTGGTCAGTA CTGCTCGATG
AACAGCTTTA CCCAATTAAC CCTTCGCACC TTGCAGCGCG AAAAGAGAGT GGTCCAATGG
CCCCCGCGAA CAGGCGATCA ACCCCTGGTC TGA
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| Protein sequence | MLDDLLPYYE KELSHLRFLG QEFAAQYPKI ASRLLIEGDN CEDPHTERLI EAFSFLSARV
HKKLDDEFPE IVESFLEVLY PHYLRPTPSM SIVEFNMGKQ EKVTESYRVA RHTELHANPV
DGIVCKFRTC YPVELWPIAV QSASFIEMER SAFNGHSADL IARLRIGLTA TSDVLFGKME
MDSLRFFLDG ESTLMHQLYE LLFNNLAKAT LSFEDEGRTR EVVLPAGALK SVGYGLDEGL
VDYSERSFLG YRLLHEYFTF PDKFMFFDLS GFARILAGKE IGKVEINFYF SDYDLTDRLA
RLTQNVSRNN FKLNCTPIIN LFRQQAEPIK LTHVQHEYAV TPDVRLQSSA EVVSIDRVRR
VKKINGNDQV GTCHPFFEPR GDQGPGQSFW IARRRPTQSR QSDGSNMFIR VVDRDLELID
SNNDTLSIRL TCSNRDLPLM LPFGGERGDF NIPSNSVIKD IRCLRKPTAT VRVPLGNGVI
WRLISHLSLN HMSLVSKGRE VLLELLSLYN YRNVSAIRKQ INGIVSVSSE PVVARIGHPR
PNFVRGVGIT LKFDESQYTG SGVFLFGMVL DHFFGQYCSM NSFTQLTLRT LQREKRVVQW
PPRTGDQPLV
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