Gene Psyr_4943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4943 
Symbol 
ID3370495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5858565 
End bp5859005 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content53% 
IMG OID637655312 
ProductLysM domain/BON superfamily protein 
Protein accessionYP_238008 
Protein GI66048167 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTA TCAGTTTCAT CAAAGAAGCA GGCGAGAAAA TTCTGGATGC ACTTCTGCCA 
GATAAAGCCA ACGCCGATGA GGTGCTGAAA AAGCATATCT CCGAAGTCGG CCTGGGCAAC
CCCAATGTGC AGACCGAGGT TAACGGCGGC ACGGTCATCG TCAAAGGCGA AGTCTCCAGC
CAGGAAGAGC GGGAAAAGAT CGTTCTGACC CTGGGCAATA TCCACGGCGT GGAAAAAGTC
GACGACCAGA TGACTGTCTC GGGCGGCGCA GGCGCTGAGT CCGAATACGT GGAAGTGAAG
TCGGGCGACA CCCTCAGCGC TATTTCCAAG CGCGTGTATG GCGATGCCAA CCAATACCAG
AAAATCTTTG AAGCCAACAA GCCCATGCTC AAGAGCGTGG ACAAGATTTA TCCGGGTCAG
AAGCTGCGTA TTCCGAAGTG A
 
Protein sequence
MSLISFIKEA GEKILDALLP DKANADEVLK KHISEVGLGN PNVQTEVNGG TVIVKGEVSS 
QEEREKIVLT LGNIHGVEKV DDQMTVSGGA GAESEYVEVK SGDTLSAISK RVYGDANQYQ
KIFEANKPML KSVDKIYPGQ KLRIPK