Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4938 |
Symbol | |
ID | 3370490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5853956 |
End bp | 5855347 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637655307 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_238003 |
Protein GI | 66048162 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCGG ACACAGCCAT CGACAGCCAG ATTCAGGTGG TGCTGATCGA CGACGATTCG CACCTGCGTC AGGCCCTGCG TCAGACGCTG GACCTGGCTG GCCTGAACGT TCTATCACTG CCCGAAGCGA CCGGGCTGGC CGAGCGCATC GGCCGCGACT GGCCGGGCGT AGTGGTCAGC GATATTCGCA TGCAGGGCAT GGATGGCCTG GAACTGCTCG ACCAGCTTCA CGCGCAGGAC CCCGACCTGC CGGTGCTGCT GATCACCGGG CATGGCGATG TACCGTTGGC GGTAAAGGCC ATGCGCGCCG GGGCCTACGA CTTTCTGGAA AAGCCCTTCG CCAGCGACGC CATGCTCGAC AGCGTGCGCC GTGCCCTGGC GCTGCGCCGT CTGGTGCTGG ATAACCGCAG CCTGCGCCTG GCCCTGAGTG ATCGCCAACA ACTGAGCACA CGCCTGATCG GTCAGTCGCC GCCGATCCTG CGTCTGCGCG AACAAATCGG CGCATTGGCC GGGACGCGAG CCGACGTGCT GATCCTCGGC GAAACCGGCG CAGGCAAAGA AGTGGTCGCC CGCGCGCTGC ACGACCTGTC CAACCGCCGC AGCGGCCCGT TCGTGGCGAT CAACGCCGGG GCGCTGGCTG AATCGGTGGT GGAAAGCGAG CTGTTCGGTC ACGAGCCAGG CGCCTTCACC GGCGCGCAGA AGCGGCGTAT CGGCAAGTTC GAATTTGCCA ACGGCGGTAC GCTGTTCCTC GATGAAATCG AAAGCATGAG CCTGGACGTG CAGGTCAAGC TGCTGCGCCT GCTGCAGGAG CGCGTGGTTG AGCGAATGGG CAGCAATCAG CAGATCCCGC TGGACATCCG CATCATCGCC GCGACCAAGG AAGACCTGCG TCACGCGGCC GATCAGGGCC GCTTCCGGGC AGACTTGTAT TACCGCCTGA ACGTGGCCTC GCTGCGTATC CCGCCGTTGC GCGAACGGGG TGAAGATGCG CTGATGCTGT TCGAACATTA CGCCGATGCC GCGAGCATGC GCCACGGCAT CCCCAAGCAC GAACTCAAGC CGGGCCAGCG CGCGCTGCTG TTGCGGCATA ACTGGCCGGG CAACGTCCGG GAACTGCAAA ACGCTGCCGA GCGCTTTGCG CTGGGTCTGG AACTGGAGCT GGAGCCGGAA GGCGTTGATG CAGAGCAGGC GCCACCGCCG GGCGGCGGGC TGAGCGATCA GGTGGAAAGC TTCGAGCGCG CCTTGATCGC CGCCGAACTG GCGCGCCCGC ACAGCTCGGT GCGCAGCCTC GCGGAAGCGC TGGGTGTGCC GCGTAAGACC CTGCACGACA AACTGCGCAA GCACGGCCTG ACGTTTGGCG ACAGCAGTGG AGCCTCCGAT GATACCGATT GA
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Protein sequence | MSSDTAIDSQ IQVVLIDDDS HLRQALRQTL DLAGLNVLSL PEATGLAERI GRDWPGVVVS DIRMQGMDGL ELLDQLHAQD PDLPVLLITG HGDVPLAVKA MRAGAYDFLE KPFASDAMLD SVRRALALRR LVLDNRSLRL ALSDRQQLST RLIGQSPPIL RLREQIGALA GTRADVLILG ETGAGKEVVA RALHDLSNRR SGPFVAINAG ALAESVVESE LFGHEPGAFT GAQKRRIGKF EFANGGTLFL DEIESMSLDV QVKLLRLLQE RVVERMGSNQ QIPLDIRIIA ATKEDLRHAA DQGRFRADLY YRLNVASLRI PPLRERGEDA LMLFEHYADA ASMRHGIPKH ELKPGQRALL LRHNWPGNVR ELQNAAERFA LGLELELEPE GVDAEQAPPP GGGLSDQVES FERALIAAEL ARPHSSVRSL AEALGVPRKT LHDKLRKHGL TFGDSSGASD DTD
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