| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4934 |
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| Symbol | |
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| ID | 3370486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5847117 |
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| End bp | 5850029 |
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| Gene Length | 2913 bp |
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| Protein Length | 970 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637655303 |
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| Product | hypothetical protein |
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| Protein accession | YP_237999 |
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| Protein GI | 66048158 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases
[COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTG CCACGCTCAT CCGCCGATCC AGTCTGCCTT GCCCCGAGGT CAGCGCGGAC
CAGGCGCTGC AATTGCTCGC GCAGCACTAC GGGCTGAGCG GCACCCTGAA AGCGCTGGGC
AGCCAGCAGG ATCGTAACTT TCTGCTGGAT ACCGGCACGC GGCGTTATGT GCTGAAAATC
TGCCACGGGG CGTATTCGAC CAGCGAGCTG AACGCCCAGC ACGCGGCGTT GCATCATCTG
GCTGGCCACA GTACGGTCAA GGTGCCGGGC GTGATCCGTG CCATCGACAC CGAACAGTTA
CTGTCGGTCG ACATCGACGG GCAGGCGGTG CATGTGCGCC TGCTGGAGTT CATCGACGGG
CAATCGCTGG GGCATGTCGA GCACCTGGGG CGTGACCTCG TGGTCGAGCT GGGCGAACTG
TGTGCCCATG TGGATATTGC GCTGGCCGAT TTCGACCACC CCGGTCTGCA GCGCATTCTG
CAGTGGGACC CGCGCCACGC CCACGCGTTG ATCAAGCACC TGCTGCCGGT GATCAAGGAT
GCCGACGCCC GCGCCTGTCT GATCGAAGCC GGTGAGCAGG CTCATCGCCG TCTGTTGCCA
TTGATTGCCG CACTGCCGAT ACAGGCAGTG CATCTGGACA TCTCCGAGCA CAACGCAGTC
TGGCGACGCG AGGCGGGGCA CCCGTGGCAC TTGCAGGGGC TGATTGATTT CGGCGATCTG
CTCAGTACCT GGCGAGTGGC CGATCTGTCG GTGACCTGCG CGGCGCTGCT GCACCACGCC
GAGGGCGACC CGCTGTACAT CCTCCCGGCC ATTGCCGCCT ATCACGCCCT CAATCCGCTG
AAGATCGAGG AATTGCAGGC GCTCTGGCCG CTGATCGTGG CTCGATCCGC AGTGCTTGTG
CTCAGCAGCG AACAGCAGGC CAGCGTCGAG CCTGGCAACG CGTATATCCA GGCCAACCTT
GCCGGCGAAT GGAACATCTT CGATGTCGCC ACTTCGGTGC CGATGGCGCT GATGGAAGCC
GCCATTCTGC GCGCGGTGGG ACTGGACCTG CCGCCTGTCG AGCAACCTGC CTATTCGCCG
TTGTTGCCCA GCCTGGCGGG GCTTCAGCCG GTGCTGGTGG ATCTGGGCGT GCTCAGCGAG
CACTTCGTGG CAGGCAACTG GGAGCAGAGC GGCATCGATG AATACCTGCT TTCGCAAGCG
GCCGGGGACA GTGGTCTGGC AGCCAGCAGG TTCGGTGAAT ACCGTCTGTC ACGCACCTTG
CCTGACTGCG CCAGCGAGCC GGAGACCTTT GCGCTGCACG TCGAATTGCA TGTGCCCGCA
GCAACGCCGC TGCATGCGCC GTTCGAGGGC ACCTTGCGGC TGACGGCCGA TGCTGCGGTG
CTGTTGGTCG GCGAGCGCAT CAGTTTGAAA CTGTGGGGTG TGTTGCCGGA GGCTTCGCTG
CAGGGTCAGG TGGCGGCGGG TTCTTTGATC GGGCAGGGCG GTGGCTCGCT GTTGCTGCAA
TTATGTACCG CGCCGGACCT CAGCCCGCCG CTGTTCAGCA CACCGGCCTG GGCAGATGCC
TGGCGCGCAG TGTGCCCGTC GCCCTCGGCG CTGCTGGGTT TTGATTGTGA CGCGCCAGCC
TTGCAGGACG CCGGGCAATT GCTGGCGCGC CGTGATGCCA GCTTTGCCCG CTCGCAAAAG
CACTACTACC AGGCCCCGCC GCACATCGAG CGCGGCTGGC GTAACCACCT GATCGACATG
CAGGGCCGCT CCTACCTGGA CATGCTCAAT AACGTCGCCG TTCTCGGTCA TGGCCATCCG
CGCATGGCTC ACGAGGCGGC GCGCCAGTGG TCGTTGCTCA ACACCAACTC GCGTTTTCAT
TATGCGGCGA TCGCCGAGTT CTCCGAGCGC CTGCTCAAGC TGGCCCCCGA GGGCATGGAT
CGCGTGTTTC TGGTCAACAG CGGCACCGAG GCCAACGATC TAGCGATCAG GCTGGCGTGG
GCTTACAGCG GTGGTCGCGA CATGCTCAGT GTGCTGGAGG CGTATCACGG CTGGTCGGTG
GCCACCGATG CCATTTCAAC CTCTATCGCC GACAACCCGC AGGCGCTCAG CACGCGCCCG
GACTGGGTGC ATCCGGTCAC CGCGCCCAAC ACCTATCGCG GGCCGTTCAG GGGCGCGGAC
AGTGCGCCTG AGTACGTGCG CAGTGTCGAT CAGGCCCTTG CCACGCTGGC TGAGCAGCAA
CGGCAGGTGG CGGGCTTCAT CTGCGAGCCG GTGTATGGCA ATGCGGGCGG GATTTCCCTG
CCGCCGGGGT ATCTGCAACA GGTGTATCAG AAGGTCCGCG CTGTGGGTGG CGTGTGCATT
GCCGATGAGG TGCAGGTGGG TTATGGCCGG CTGGGTCATC ACTTCTGGGG CTTCGAAGAG
CAGGGCGTGG TGCCGGACAT CATCAGCATG GCCAAAGGCA TGGGCAACGG CCATCCGCTG
GGCGCGGTGA TCACCCGCCG TGAGATCGCC GAGGCGCTGG AGGCCGAGGG TTATTTCTTC
TCGTCATCCG GTGGCAGTCC GGTCAGTTGC CGGATCGGCA TGGCGGTGCT GGATGTCATG
GAGGAGGAAA AACTCTGGGA CAACGCCCGG ATCGTGGGCG ACCACTTCAA GGCGCGGCTG
CAGGCCCTGG CCGATATACA TCCGCTGGTG GGCGCGGTGC ACGGCATGGG CTTTTATCTG
GGCATGGAAC TGGTCCGCGA CCGCCACACC CTGGAACCCG CCACAGAAGA AACCGCGCGC
CTGTGCGAAC GCCTGCGTGA GCTGGGCATT TTCATGCAGC CGACCGGCGA CTACCTGAAC
ATCCTGAAAA TCAAACCCCC GATGTGCACC ACCCGGCAAA GCGTGGACTT TTTCGTCGAC
AACGTATCGA AGGTTTTGCG TGAACTGGAA TAG
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| Protein sequence | MPLATLIRRS SLPCPEVSAD QALQLLAQHY GLSGTLKALG SQQDRNFLLD TGTRRYVLKI
CHGAYSTSEL NAQHAALHHL AGHSTVKVPG VIRAIDTEQL LSVDIDGQAV HVRLLEFIDG
QSLGHVEHLG RDLVVELGEL CAHVDIALAD FDHPGLQRIL QWDPRHAHAL IKHLLPVIKD
ADARACLIEA GEQAHRRLLP LIAALPIQAV HLDISEHNAV WRREAGHPWH LQGLIDFGDL
LSTWRVADLS VTCAALLHHA EGDPLYILPA IAAYHALNPL KIEELQALWP LIVARSAVLV
LSSEQQASVE PGNAYIQANL AGEWNIFDVA TSVPMALMEA AILRAVGLDL PPVEQPAYSP
LLPSLAGLQP VLVDLGVLSE HFVAGNWEQS GIDEYLLSQA AGDSGLAASR FGEYRLSRTL
PDCASEPETF ALHVELHVPA ATPLHAPFEG TLRLTADAAV LLVGERISLK LWGVLPEASL
QGQVAAGSLI GQGGGSLLLQ LCTAPDLSPP LFSTPAWADA WRAVCPSPSA LLGFDCDAPA
LQDAGQLLAR RDASFARSQK HYYQAPPHIE RGWRNHLIDM QGRSYLDMLN NVAVLGHGHP
RMAHEAARQW SLLNTNSRFH YAAIAEFSER LLKLAPEGMD RVFLVNSGTE ANDLAIRLAW
AYSGGRDMLS VLEAYHGWSV ATDAISTSIA DNPQALSTRP DWVHPVTAPN TYRGPFRGAD
SAPEYVRSVD QALATLAEQQ RQVAGFICEP VYGNAGGISL PPGYLQQVYQ KVRAVGGVCI
ADEVQVGYGR LGHHFWGFEE QGVVPDIISM AKGMGNGHPL GAVITRREIA EALEAEGYFF
SSSGGSPVSC RIGMAVLDVM EEEKLWDNAR IVGDHFKARL QALADIHPLV GAVHGMGFYL
GMELVRDRHT LEPATEETAR LCERLRELGI FMQPTGDYLN ILKIKPPMCT TRQSVDFFVD
NVSKVLRELE
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