Gene Psyr_4933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4933 
Symbol 
ID3370485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5845897 
End bp5846775 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content60% 
IMG OID637655302 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_237998 
Protein GI66048157 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR03381] N-carbamoylputrescine amidase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.209824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTA TCGTTTCTGT CGCTGCTACC CAGATGGCCT GCTCCTGGGA TCTGGAAGCC 
AACATCGAGA CCGCTGAAAA GCTGGTACGT GAAGCTGCCG CCAAGGGCGC CCAGATCATC
CTGATTCAGG AACTGTTCGA AACCCCGTAC TTCTGCCAGA AGCCGAACCC GGACTATCTG
CAGTTGGCGA CCACCCTCGA GTCCAACGTC GCAATCAAGC ACTTCCAGAA AATCGCCAAA
GAACTGCAGG TCGTCTTGCC GATCAGCTTC TTCGAGCTGG CAGGGCGTGC ACGTTTCAAC
AGCATCGCGA TCATCGACGC AGACGGCAGC AACCTGGGCA TCTACCGCAA GAGCCACATC
CCGGACGGCC CTGGCTACCA CGAAAAGTAC TACTTCAACC CGGGCGACAC CGGCTTCAAA
GTCTGGCAGA CCCGTTATGC GAAAATCGGC GTCGGTATCT GCTGGGATCA GTGGTTCCCG
GAGTGCGCGC GCAGCATGGC GTTGCAGGGC GCGGAAATTC TGTTCTACCC GACTGCCATC
GGCAGCGAGC CGCATGACAA GACCATCAGC TCGCGCGACC ATTGGCAGCG CGTGCAGCAA
GGTCACGCCG GCGCGAACCT TATGCCGCTG ATTGCCAGCA ACCGCATTGG CAACGAAGAG
CAGGACGGCT ACGACATCAC CTTCTACGGT TCGTCGTTCA TCGCCAACCA GTTCGGTGAA
AAAGTCGCCG AGCTCAACGA AACCGAAGAG GGCGTGCTGG TCCACAGCTT CGACCTGGAC
GAGCTGGAGC ACATCCGCAG TGCCTGGGGC ACGTTCCGTG ATCGCCGCCC TAACCTGTAC
GGCGCGGTGA AGACCCTCGA CGGTTCGCTG GAGTCCTGA
 
Protein sequence
MSRIVSVAAT QMACSWDLEA NIETAEKLVR EAAAKGAQII LIQELFETPY FCQKPNPDYL 
QLATTLESNV AIKHFQKIAK ELQVVLPISF FELAGRARFN SIAIIDADGS NLGIYRKSHI
PDGPGYHEKY YFNPGDTGFK VWQTRYAKIG VGICWDQWFP ECARSMALQG AEILFYPTAI
GSEPHDKTIS SRDHWQRVQQ GHAGANLMPL IASNRIGNEE QDGYDITFYG SSFIANQFGE
KVAELNETEE GVLVHSFDLD ELEHIRSAWG TFRDRRPNLY GAVKTLDGSL ES