Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4932 |
Symbol | |
ID | 3370484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5844785 |
End bp | 5845891 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637655301 |
Product | agmatine deiminase |
Protein accession | YP_237997 |
Protein GI | 66048156 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
TIGRFAM ID | [TIGR03380] agmatine deiminase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.803102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC TCAATAGCAC GCCACGCGCC GACGGTTTCC ACATGCCGGC CGAATGGGCA CCGCAAACCC AGGTCTGGAT GGTCTGGCCC GAGCGCCCGG ACAACTGGCG CCTGGGTGGC AAGCCCGCCC AGGCTGCCCA CGTCGCCATC GCCAAGGCCA TCGCCCGCTT TGAGCCGGTC ACGGTGGCTG TGTCGGCTGC ACAATACGAC AACGCCCGTG CGCGGCTGGA CATGCCGAAC ATCCGGGTTG TGGAAATGAG CAGCAACGAT GCCTGGGTGC GCGACAGCGG GCCGACCTTC GTCATCAACG ACCGTGGCGA AGTGCGCGGC GTGAACTGGG AATTCAATGC CTGGGGCGGC TTCGACGGCG GCCTGTATGC GCCGTGGAAT CTCGATTCGC AACTGGGCGG CAAAGTACTC GAAATCGAGC GCTGCCCGCG TTACGTCACC GAAGGCTTCG TTCTCGAAGG CGGCTCGATC CACGTGGATG GCGAGGGCAC GCTGATCACC ACCGAAGAGT GCCTGCTCAA TCGCAACCGC AACCCGCACC TGACCCGCGA ACAGATCGAA ACGATCCTCG GCGATTACCT GGCTGTGGAT AAAGTCATCT GGTTGCCGGA AGGCCTGTTC AACGACGAAA CCGACGGGCA TGTGGATAAC TTCTGCTGCT ACATCCGTCC GGGCGAGGTG TTACTGGCCT GGACCGATGA TCCCGAAGAC CCCAACTACT CACGCTGCCA CGCGGCATTG AGTATTTTGG AAAACACCCT GGATGCCAAG GGTCGTGCGT TTATCGTGCA TAAAATGCCG ATTCCCGGCC CATTGTTCGC CACGGAAGAA GAATGCGCAG GCGTCGATCA GGTGCATGGC AGCCAGGAGC GCAACCCTTC GGTGCGCCTG GCCGGGTCGT ATGTGAATTT TCTGATCGTC AACGGCGGCA TCATTGCGCC GAGTTTCGAC GATCCGATGG ACGAAAAGGC CCGTGAGATC CTGCAAAAGC TGTTTCCAGA GCATGAGGTG GTGATGGCGC CGGGCCGTGA ATTGCTGCTA GGTGGGGGCA ATATCCACTG CCTGACACAG CAACAGCCAG CCCCTCACAA GAACTAG
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Protein sequence | MTTLNSTPRA DGFHMPAEWA PQTQVWMVWP ERPDNWRLGG KPAQAAHVAI AKAIARFEPV TVAVSAAQYD NARARLDMPN IRVVEMSSND AWVRDSGPTF VINDRGEVRG VNWEFNAWGG FDGGLYAPWN LDSQLGGKVL EIERCPRYVT EGFVLEGGSI HVDGEGTLIT TEECLLNRNR NPHLTREQIE TILGDYLAVD KVIWLPEGLF NDETDGHVDN FCCYIRPGEV LLAWTDDPED PNYSRCHAAL SILENTLDAK GRAFIVHKMP IPGPLFATEE ECAGVDQVHG SQERNPSVRL AGSYVNFLIV NGGIIAPSFD DPMDEKAREI LQKLFPEHEV VMAPGRELLL GGGNIHCLTQ QQPAPHKN
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