| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4911 |
|---|
| Symbol | |
|---|
| ID | 3370462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5823615 |
|---|
| End bp | 5824388 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637655279 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_237976 |
|---|
| Protein GI | 66048135 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGG CCACGCCCGC CCTGGAAATC CGCAACCTGC ACAAGCGCTA CGATCAGCTT
GAGGTGCTCA AAGGTATCTC GCTGACGGCT CGCGACGGCG ACGTCATATC GATCCTCGGC
TCGTCCGGTT CCGGCAAGTC CACATTGCTG CGCTGCATCA ACCTGCTGGA AAACCCGCAT
CAGGGCCAGA TTCTGGTGGC CGGCGAAGAA TTGAAGCTCA AGGCAGCGCG CAATGGCGAC
CTGATTGCTG CCGATAACCG GCAGATCAAT CGTCTGCGCA GCCAGATCGG CTTTGTGTTC
CAGAATTTCA ACCTGTGGCC GCACATGAGC GTGCTCGATA ACATCATCGA AGCCCCGCGT
CGCGTCCTCG GTCAGAGCAA GGCCGAGGCC ATTGCGGTGG CTGAAGAGCT GCTGGCCAAG
GTAGGTATCG CCGACAAGCG CCATGCCTAC CCTGCGCAAC TTTCCGGCGG GCAGCAGCAA
CGCGCCGCCA TTGCGCGTAC GCTGGCCATG CAACCACGGG TTATCCTGTT CGACGAGCCG
ACCTCGGCCC TCGACCCGGA GATGGTGCAG GAAGTACTCG GCGTCATCCG CGCACTGGCC
GAAGAAGGCC GGACCATGCT GCTGGTGACC CACGAAATGA ATTTTGCACG TCAGGTATCA
AGTGAAGTGG TGTTTTTGCA TCAGGGAATG GTCGAAGAAC AGGGCACACC GCAGCAAGTA
TTCGAAAACC CGCTGTCGGC AAGGTGCAAA CAATTCATGT CGAGTCACCG CTAA
|
|---|
| Protein sequence | MAEATPALEI RNLHKRYDQL EVLKGISLTA RDGDVISILG SSGSGKSTLL RCINLLENPH
QGQILVAGEE LKLKAARNGD LIAADNRQIN RLRSQIGFVF QNFNLWPHMS VLDNIIEAPR
RVLGQSKAEA IAVAEELLAK VGIADKRHAY PAQLSGGQQQ RAAIARTLAM QPRVILFDEP
TSALDPEMVQ EVLGVIRALA EEGRTMLLVT HEMNFARQVS SEVVFLHQGM VEEQGTPQQV
FENPLSARCK QFMSSHR
|
|---|
| |