| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4901 |
|---|
| Symbol | |
|---|
| ID | 3370451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5814937 |
|---|
| End bp | 5816004 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637655268 |
|---|
| Product | A/G-specific adenine glycosylase MutY |
|---|
| Protein accession | YP_237966 |
|---|
| Protein GI | 66048125 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1194] A/G-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCCG AACAATTCTC CAGCGCCGTG CTGGACTGGT ACGACCGTCA TGGCCGACAT
GACCTGCCCT GGCAACAAGA CATCACGCCG TACCGGGTCT GGGTATCGGA AATCATGCTG
CAGCAGACCC AGGTCAGCAC CGTTCTGAGC TACTTCGACC GCTTCATGGA GGCCCTGCCG
ACCGTGCAGG CGCTGGCCGA AGCGCCCGAG GACGAAGTAC TGCACCTGTG GACCGGGCTG
GGTTACTACA CCCGCGCCCG CAACCTGCAG AAAACGGCCA AAATCGTCGT CGCCGAGCAT
GGCGGCGAGT TTCCCCGTGA TGTCGAAAAA CTCATTCTGC TGCCCGGCAT CGGCCTGTCC
ACCGCAGGCG CAATCGCCAG CCTGAGCATG GGCATTCGCG CGCCGATCCT CGATGGCAAC
GTCAAACGCG TGCTGGCGCG CTTCACCGCG CAAGAGGGCT ACCCCGGCGA GCCGAAGGTG
GCCAAGCAGC TGTGGGCCAC CGCTGAACGC TTCACGCCGC ACAGCCGGGT CAACAACTAC
ACCCAGGCGA TGATGGACCT GGGGGCGACA CTCTGCACCC GCAGCAAACC CAGCTGCCTG
CTCTGTCCGC TGGAGCGCAG TTGTGAGGCG CACATGCTGG GCCTGGAAAC GCGCTACCCG
ATCCCCAAGC CGCGCAAGAC CGTGCCGCAG AAACGCACGC TCATGCCGAT GCTCGCCAAC
GAAGACGGCG CGATCCTGCT TTATCGTCGC CCTTCCAGCG GCTTGTGGGG CGGCCTGTGG
AGCCTGCCGG AACTGGACGA CTTCGATGAC CTTCAGCACC TGGCCACGCA ACACGCGCTG
CAACTGGGCG AGCACCATGA ACTGCCGGGA CTTATCCACA CCTTCAGCCA CTTCCAGTTG
AGCATCGAAC CCTGGCTGGT CAAGGTCCGC GAGTCCGCCG ATCACGTGGC CGAGGCCGAC
TGGCTCTGGT ATAACCTCGC CACCCCGCCA CGCCTGGGCC TTGCCGCCCC GGTGAAAAAG
CTGCTCAAAC GCGCAGCCGA CGTATTGAAC GCAGGAGAGT CGTCATGA
|
|---|
| Protein sequence | MQPEQFSSAV LDWYDRHGRH DLPWQQDITP YRVWVSEIML QQTQVSTVLS YFDRFMEALP
TVQALAEAPE DEVLHLWTGL GYYTRARNLQ KTAKIVVAEH GGEFPRDVEK LILLPGIGLS
TAGAIASLSM GIRAPILDGN VKRVLARFTA QEGYPGEPKV AKQLWATAER FTPHSRVNNY
TQAMMDLGAT LCTRSKPSCL LCPLERSCEA HMLGLETRYP IPKPRKTVPQ KRTLMPMLAN
EDGAILLYRR PSSGLWGGLW SLPELDDFDD LQHLATQHAL QLGEHHELPG LIHTFSHFQL
SIEPWLVKVR ESADHVAEAD WLWYNLATPP RLGLAAPVKK LLKRAADVLN AGESS
|
|---|
| |