Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4900 |
Symbol | |
ID | 3370450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5812619 |
End bp | 5814844 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637655267 |
Product | AsmA |
Protein accession | YP_237965 |
Protein GI | 66048124 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGT TCGGCAAAAT CCTGGGGCTG TTTATTCTCG GGTTGTTGCT GATCATCGTG GCTCTCGGCT TCGCCCTGAC CCACCTGTTT GATCCCAACG ACTACAAAGA CGAGATTCGC CAGCTGGCAC GCGACAAGGC CAACGTCGAG CTGACGCTCA ATGGCGATAT CGGCTGGAGC CTGTTCCCCT GGCTCGGCCT GGAATTGCAC GACGCCCATG TCGCCACCCT GACCGCTCCC GATCAGCCGT TCGCCGATGT GCAGATGCTC GGCCTGTCCG TTCGTGTTCT GCCACTGCTG CGTCGCCAGG TACAGATGAG CGACATTCGC GTCGAAGGCC TGAACCTGAC CCTGCACCGT GATGAAAACG GTCATGGCAA CTGGGAAGAC ATCGGCAAGC CAGCCGTGGC AAGCACTGAA ACACCTGGCG AGACAACACC GGCCGCGGCT CCGGACGCGC CCAAAGCGGA TCGCCCTGCC CAGCCGATCC GCCTGGATAT CGACAGCCTG ACCGTCAACA ACGCCCGCGT GGATTACAGC GATGCCCGAA AAGGCCGGAC CTTCATGGCC GAGAGCATTC AGCTGAGTAC CGGGCCGATT CGTGAGGCGT CCGATATCCC GATCAAACTG ACGGCGTTCC TGAGCACCAA CCAGCCCGTC GTGCGCGCCA AGACCGAGCT GGTCGGCGAA TTGCGCATGG ACCGCGTGCT CAAGCGTTAT CAATTCGAAG ACATGCGCCT GTCCGGTGAA GTCGCCGGCG AGCCGCTGCA AGGCAAGACC GTGACCTTCT CGGCGCAGGG CCAGTTGCTC GTCGACCTGG CAGCCAATAT CGCCGAATGG AACAGCCTCA AAGTCTCGGC CAACCAGTTG CGTGCACTCG GCGAACTGCG TGCCCGCGAT CTGGACAAAA CACCGCAGAT CAGCGGCGGC CTGTCCATTG CCCAGCTTGA TCTGCGCGCG TTCTTCGAAA ACATCGGCCA GCCGCTGCCA GCCATGTCCG AGGGCGCGCT GAGCAAGGTT GAAATGGTCA CGCGTCTGGC AGGTACGCCT ACCAGCCTTG CGCTGGAAAA CCTCAACCTG AAAGTCGACG ACAGCAGCTT CACGGGACGC ATCGCGGTGG ACGACTTCGC CAAACAGGCG CTGCGTGTCC AGCTCAAGGG CGATACCTTC GACGCCGACC GCTATCGTCC GGCTGAAAGC GAAGAAAGCA AAGGTGCCAA GGCCGCGCGC AAATCCGAAG TGCAGTCCGG TGAAGCCGCC GCCGCTGCGG GCGACTCGCC GCTGCCCGAA CAACCGACCA AGGCCGCCTG GAGCACGGCA AAACTGCTGC CGCTGGAGCG CTTGCGTACA CTGGATGTCG AGGCTGACCT GAGCTTTGGC AAACTGACCC TGAACAAACT GCCCATCGAC AACGCAGCGT TCAAGACCCA GGCCAACGGT GGCGTTATCA AGGTCGATAC GCTGAGTGGC GACCTGTACA ACGGCAATTT CGAGGTCAAG GGCAATCTGG ACGCGCGTCC GGACACGCCT GTGGCCACTG TACAGACGCG CATTGCCAAA GTGCCGGTCG AACGCGTTCT GGAAAGCCAG GGGCAGACGC CGCCAGTGCG CGGCCTGCTG ACCCTCGACA GCAACCTGAC CGGCACAGGC AACAGCGAAA AAGCCCTGAT CGACAGCCTG AACGGCACCG CCAGCTTTGC GCTCAATAAC GGCGTACTGG TCAATGCCAA CCTGGAGCAG CAGCTGTGCA AGGGTATTTC GATCCTCAAC CGCAAGACGC TCAGCGGCGA ACCGCGTGCC AAGGACACCC CTTTCCAGCA GCTCAACGGC AATCTGGTGA TACGCAATGG CGTCGCCAGC AACCCGGACC TCAAGGTCCG CACGCCTGGC ATGGCCGTCA ACGGTAACGG CGACGTCGAC CTGCGCGTGC TGGGCATGAA CTACCGCGTC GGCATCATCG TTGAAGGCGA CAAGAGCGAC ATGCCGGACC CGGCCTGCGA GGTCAACCCG CGCTTTGTCG GCATCGAGTG GCCGGTGCAG TGCCGTGGCC CGCTGGAACT GGGTGCCAAG GCCTGCCGTC TGGACAAGGA AGGCGTCGGC CAGATCGCTG CGAAACTGGC GGGCGACCGG ATCAGCGAGA AGCTTGAGGA CAAGCTGAAC GACAAACTCG GTGACAAGGT CAGCCCCGAG CTCAAGGACG CCCTCAAGGG CCTGTTCAAA CGCTAG
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Protein sequence | MKAFGKILGL FILGLLLIIV ALGFALTHLF DPNDYKDEIR QLARDKANVE LTLNGDIGWS LFPWLGLELH DAHVATLTAP DQPFADVQML GLSVRVLPLL RRQVQMSDIR VEGLNLTLHR DENGHGNWED IGKPAVASTE TPGETTPAAA PDAPKADRPA QPIRLDIDSL TVNNARVDYS DARKGRTFMA ESIQLSTGPI REASDIPIKL TAFLSTNQPV VRAKTELVGE LRMDRVLKRY QFEDMRLSGE VAGEPLQGKT VTFSAQGQLL VDLAANIAEW NSLKVSANQL RALGELRARD LDKTPQISGG LSIAQLDLRA FFENIGQPLP AMSEGALSKV EMVTRLAGTP TSLALENLNL KVDDSSFTGR IAVDDFAKQA LRVQLKGDTF DADRYRPAES EESKGAKAAR KSEVQSGEAA AAAGDSPLPE QPTKAAWSTA KLLPLERLRT LDVEADLSFG KLTLNKLPID NAAFKTQANG GVIKVDTLSG DLYNGNFEVK GNLDARPDTP VATVQTRIAK VPVERVLESQ GQTPPVRGLL TLDSNLTGTG NSEKALIDSL NGTASFALNN GVLVNANLEQ QLCKGISILN RKTLSGEPRA KDTPFQQLNG NLVIRNGVAS NPDLKVRTPG MAVNGNGDVD LRVLGMNYRV GIIVEGDKSD MPDPACEVNP RFVGIEWPVQ CRGPLELGAK ACRLDKEGVG QIAAKLAGDR ISEKLEDKLN DKLGDKVSPE LKDALKGLFK R
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