Gene Psyr_4899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4899 
Symbol 
ID3370449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5810459 
End bp5812120 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content60% 
IMG OID637655266 
Productmajor facilitator transporter 
Protein accessionYP_237964 
Protein GI66048123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA GCACAGCCTT GGGCGGCGAA GCCGTTCAGC CTGCGTTCTT GTCCAAAGAG 
CGCATTATCG CCAAGCCAGG TTTCAACCGT TGGCTTGTTC CACCTGCAGC ACTGGCCATC
CATCTTTGTA TCGGTATGGC TTACGGCTTC TCGGTATTCT GGTTGCCGCT GTCGAAGGCT
ATCGGTGTTA CGGCACCTGT CGCTTGCACA CCGGACATGG GTTTTTTCGC GCAGATGTTC
GCGTCGACCT GTGACTGGCA GATCTCCATG CTGGGCTGGA TCTACACACT GTTTTTCATC
TTCCTGGGTT GCTCGGCTGC CATTTGGGGT GGCTGGCTGG AGCACGCAGG TCCACGCAAG
GCGGGTGTGG TTTCGGCCCT CTGCTGGTGT GGTGGCTTGC TGATTTCCGC ACTGGGCATT
TATACGCACC AGATCTGGCT GATGTGGCTG GGCTCGGGCG TGATCGGCGG TATCGGTCTG
GGGTTGGGCT ATATCTCCCC GGTATCGACC CTGATCAAGT GGTTCCCGGA CAAGCGCGGC
ATGGCGACCG GCATGGCGAT CATGGGCTTT GGCGGCGGCG CGATGGTGGG TGCACCGCTG
GCTACGGCTC TGATGGGGCA CTTCGCTTCG GCTGAAAGCG TTGGCGTATG GCAGAGCTTC
GTGGTGATGG CGGTGATCTA CTTCATCTTC ATGATCGGCG GTGCACTGGG CTACCGCGTT
CCGCCAACCG GCTGGAAACC TGAAGGCTGG ACCGCTCCGG CTGCCAAGGC CAAGAACTCG
ATGATCACCA ACCGTCACGT GCACGTCAGC GTGGCCTGGA AAACACCGCA GTTCCGTCTG
GTCTGGCTGG TGCTGTGCCT GAACGTATCG GCCGGTATCG GCATCCTGGG CATGGCCTCG
CCGCTGCTGC AGGAAGTATT CGCCGGCAAA CTGCTGGGCG TCGACCTGAC CTTCAGCCAG
CTCAATGCCG ATCAACTGAA AGCCATTGCT GCGATTGCTG CCGGCTTCAC CGGTCTGTTG
AGTCTGTTCA ACATCGGCGG TCGTTTCTTC TGGGCTTCGT GCTCGGACTT CATCGGTCGC
AAGGCAACCT ACTTCGTGTT CTTCGCACTG GGCTTCCTGC TTTATGCGTC GGTTCCGACC
CTGAGCCATA TGGGTAGCAT CGCGCTGTTC GTGGCTGCGT TCTGTATCGT GCTGTCGATG
TACGGTGGCG GTTTTGCGAC GGTTCCGGCT TATCTGGCAG ACCTGTTCGG TACGCAGATG
GTCGGCGCGA TTCACGGTCG TCTGCTGACT GCCTGGGCTG CGGCCGGTGT GCTGGGTCCG
GTACTGGTCA ACTACCTGCG TGAGTACCAA CTCGCCCACG GTGTTGCACG TGCCGACGCC
TACGACATCA CCCTGTACAT CTTGTCGGGC CTGCTGGTAC TGGGCTTTAT CTGCAACCTG
CTGATTCGTC CGGTTGCCGA CAAGTACTTC ATGACCGACG CCGAACTGGC GGCTGAACAA
GCCATCGGTC ACGACAAGGG TGCCAACGCC ACGACTTCAC TGGAGTGGAA AGCCTCCGAC
AGCAGCAAGC CGCTGGTCAT CGCCGCCTGG CTGGCCGTAG GCATCCCGCT GGCGTGGGGC
GTCTGGATTA CCCTGCAGAA AACCGCAGTG CTGTTCCACT AA
 
Protein sequence
MSTSTALGGE AVQPAFLSKE RIIAKPGFNR WLVPPAALAI HLCIGMAYGF SVFWLPLSKA 
IGVTAPVACT PDMGFFAQMF ASTCDWQISM LGWIYTLFFI FLGCSAAIWG GWLEHAGPRK
AGVVSALCWC GGLLISALGI YTHQIWLMWL GSGVIGGIGL GLGYISPVST LIKWFPDKRG
MATGMAIMGF GGGAMVGAPL ATALMGHFAS AESVGVWQSF VVMAVIYFIF MIGGALGYRV
PPTGWKPEGW TAPAAKAKNS MITNRHVHVS VAWKTPQFRL VWLVLCLNVS AGIGILGMAS
PLLQEVFAGK LLGVDLTFSQ LNADQLKAIA AIAAGFTGLL SLFNIGGRFF WASCSDFIGR
KATYFVFFAL GFLLYASVPT LSHMGSIALF VAAFCIVLSM YGGGFATVPA YLADLFGTQM
VGAIHGRLLT AWAAAGVLGP VLVNYLREYQ LAHGVARADA YDITLYILSG LLVLGFICNL
LIRPVADKYF MTDAELAAEQ AIGHDKGANA TTSLEWKASD SSKPLVIAAW LAVGIPLAWG
VWITLQKTAV LFH