| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4894 |
|---|
| Symbol | |
|---|
| ID | 3370444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5806609 |
|---|
| End bp | 5807346 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637655261 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_237959 |
|---|
| Protein GI | 66048118 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATTA TCCCCGCTAT CGATCTCAAG GACGGCGCTT GCGTGCGTCT GCGTCAGGGC
CGGATGGAAG ATTCCACGGT GTTCTCCGAT GACCCGGTGG CCATGGCCGC CAAATGGGTC
GAAGGTGGTT GCCGCCGTCT GCATCTGGTC GATCTGAACG GTGCGTTCGA AGGTCAGCCG
GTCAACGGTG ATGTGGTCAC GGCCATCGCC CGACGCTACC CGAACCTGCC GATCCAGATC
GGCGGCGGCA TCCGTTCGCT GGAAACCATC GAGCATTACG TCAAGGCGGG TGTGAGCTAC
GTCATCATCG GCACCAAGGC CGTCAAAGAG CCCGAGTTCG TGGCCGAAGC CTGCCGTGCG
TTCCCCGGCA AGGTGATTGT CGGTCTGGAT GCCAAGGACG GTTTCGTCGC GACCGACGGC
TGGGCTGAAG TCAGTTCGGT GCAGGTCATC GACCTGGCCA AGCGTTTCGA AGCCGATGGC
GTGTCGGCCA TTGTCTACAC CGACATCGCC AAAGACGGCA TGATGCAGGG CTGCAACATT
CCGTTCACCG CGGCATTGGC GGCTGCCACG CGGATCCCGG TGATCGCTTC GGGTGGCATC
CATAACCTGG GCGACATTCA GGCGCTGCTG AATGCGAAGG CTCCGGGCAT CATCGGCGCA
ATCACCGGCC GTGCGATTTA CGAAGGCACG CTGGATGTGG CCGAAGCTCA GGCGCTCTGC
GACCGCGAAC AACGCTGA
|
|---|
| Protein sequence | MLIIPAIDLK DGACVRLRQG RMEDSTVFSD DPVAMAAKWV EGGCRRLHLV DLNGAFEGQP
VNGDVVTAIA RRYPNLPIQI GGGIRSLETI EHYVKAGVSY VIIGTKAVKE PEFVAEACRA
FPGKVIVGLD AKDGFVATDG WAEVSSVQVI DLAKRFEADG VSAIVYTDIA KDGMMQGCNI
PFTAALAAAT RIPVIASGGI HNLGDIQALL NAKAPGIIGA ITGRAIYEGT LDVAEAQALC
DREQR
|
|---|
| |