Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4887 |
Symbol | |
ID | 3370437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5797351 |
End bp | 5798688 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637655254 |
Product | peptidase S41A, C-terminal protease |
Protein accession | YP_237952 |
Protein GI | 66048111 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCATT TGTCCCGCCT CACCTCGCTG GCCCTGGCAA TTGCCATCGT TATCGGCGCG CCTCTGGCGC AAGCTGCCGA AAAGACCGCG CCAGCCACGC CTGCAGCAGT CTCGCCCGCC AAAACCAACG CCACCGCAAA GCCGCCGCTG CCGCTCGACG AGTTGCGCAC CTTTGCCGAG GTCATGGACC GGGTCAAGGC GGCCTACGTG GAGCCGGTCG ACGACAAGAC TCTGCTGGAG AACGCCATCA AAGGCATGCT CAGCAACCTT GATCCGCACT CTGCCTACCT CGGCCCGGAA GATTTCCAGG AGCTGCAGGA AAGCACCAGC GGCGAGTTCG GTGGGCTGGG CATCGAAGTC GGCGTCGAGG ACGGTTTCGT CAAGGTGGTT TCGCCCATCG ACGACACACC GGCTTCCAAG GCTGGCATCG AGGCAGGCGA CCTGATCGTG AAGATCAACG GTACGCCGAC CCAGGGCCAG AACATGCAGG AAGCGGTCGA CAAGATGCGC GGCAAGATCG GCGAAAAGAT CACCCTGACG CTGGTCCGCG ATGGCGGCAC GCCGTTTGAC GTGACCCTGG CGCGGGCAAC CATTCAGGTC AAGAGCGTCA AGGCGCAGAT GCTGGAAAAT GGCTACGGCT ATATCCGCAT CACCCAGTTC CAGGTCAAGA CCGGTGACGA AGTCGGCAAG GCGCTGGCCA AATTCCGCAA GGACAACGGC AAGAAGATGA GCGGCCTGAT TCTCGACCTG CGCAACAACC CGGGCGGCGT GCTGCAATCG GCCGTGCAGG TGGCGGATCA CTTCCTCACC AAAGGCCTGA TCGTCTACAC CAAAGGCCGC ATTGCTAACT CCGAACTGCG CTTCTCGGCA GACCCGGCAG ACGCCAGCGA AGGCGTGCCA CTGGTGGTGC TGATCAACGG CGGCAGCGCC TCGGCATCGG AAATCGTTGC CGGTGCCCTG CAAGACCAGA AACGCGGCAT CCTGATGGGC ACTGACACCT TCGGCAAAGG CTCGGTGCAG ACCGTCCTGC CGCTGAACAA CGATCGCGCC CTGAAGATCA CTACCGCGTT GTACTACACG CCGAACGGCC GCTCGATCCA GGCCCAGGGC ATCAACCCGG ACATCGTGGT ACGTCGGGCC AAGGTCACCA ACGAAGCGGA CGGCGAGAAC TACAAGGAAG CCGACCTGCT GGGTCACCTG GGCAATGGCA ACGGCGGCGC AGACAAACCG ACCGTCAAGA GTGGCGCAGC CGCCAAGGCG CGTCCGCAGG ATGACGACTT CCAGCTCAGC CAGGCGCTCA GCCTGCTCAA GGGGCTGAGT ATCACCCGCG GCAACTGA
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Protein sequence | MLHLSRLTSL ALAIAIVIGA PLAQAAEKTA PATPAAVSPA KTNATAKPPL PLDELRTFAE VMDRVKAAYV EPVDDKTLLE NAIKGMLSNL DPHSAYLGPE DFQELQESTS GEFGGLGIEV GVEDGFVKVV SPIDDTPASK AGIEAGDLIV KINGTPTQGQ NMQEAVDKMR GKIGEKITLT LVRDGGTPFD VTLARATIQV KSVKAQMLEN GYGYIRITQF QVKTGDEVGK ALAKFRKDNG KKMSGLILDL RNNPGGVLQS AVQVADHFLT KGLIVYTKGR IANSELRFSA DPADASEGVP LVVLINGGSA SASEIVAGAL QDQKRGILMG TDTFGKGSVQ TVLPLNNDRA LKITTALYYT PNGRSIQAQG INPDIVVRRA KVTNEADGEN YKEADLLGHL GNGNGGADKP TVKSGAAAKA RPQDDDFQLS QALSLLKGLS ITRGN
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