| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4871 |
|---|
| Symbol | |
|---|
| ID | 3370421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5782166 |
|---|
| End bp | 5783257 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637655238 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_237936 |
|---|
| Protein GI | 66048095 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCC CCAACCAGAC AGTGCTGTGC AAGTATCGCT ACGACCCGCT GGACCGTCTG
GCTTCCAGCT CGCCGGCAGG GCAGGCGGAT GTGCAGCGCT TCTATCAAAA GAACCGCCTG
GCGACCGAAA TAGAGGGTGC ATCACGACGC ACGGTCTTTC AGCATGAAGA CCTGTTATTG
GCTCAGCAGC GGCGTGTTGA GGGTGCGATC GAAACCACGT TGTTGGCGAC GGATCAGCAA
CGTTCTGTCC TGCGGCTTGT GGATAAGTTC GGGGTTGAGC CAGTGGCGTA CAGCGCCTAT
GGTCATCACC CGGCGGAAAG CGGACTGACC AGCCTGCTGG GGTTCAATGG CGAGCGGCGA
GATCCTGTGA CCGGGCATTA TCTGTTGGGG AATGGGTACC GGGCTTACAA CCCGGTGTTG
ATGCGGTTCA ACAGCCCGGA CAGTTTGAGT CCGTTTGATG AGGGCGGGTT GAATGCGTAT
GGGTATTGTG GAGGGGATCC GGTGGGAGTT GTGGATCCGT CGGGGCATAT GCCATTTTCA
ATTCTCATAC AGGCGGCAGA CATGATTGAA AAGTTCGGTC CGCAAGCAGC TACTCTTATT
GCACAGCGCG CTCTGCAAGG CGTCAGCCCT GCTGCGCGTG TTTTAGGGGG CAAACATACT
CCTGCGGCTG TACCATCCTT GGTATCTAAA AAGGCAAGTA AGCTACCGTC CGCGTCCGCG
TCCGCGTCCG CCTCTACGTC TACTTCGTCG GCTAAATCTG TTTCGAGGCG CAGGCTGACT
GAGCAGCGTA GGATGTTGGA ACTAAAAAGG AAAAATTTAA TTAATGAACT TTCGACTAGA
TTGCCTATTG ATGAGAGTTC CGCAAAGAGA CGGTATGAAA GGTTTGAGGG GCGCGTAAGA
GACGCTGAGT ATCTAATAAA ACATTACACG GAAAACCCTG AGAGAGTTAA GCATAGTATA
ATTAATCCAT CCCAGTCGCG AGAGCTTTTT GGAGCGAAGC TTGTTAACGC AGAAACTAAT
TTTAATGCAT ACCGTAAAAA ATATATCGAA AAATTCGGTG AGTACGTTCG GGATCCGCCT
AAAGATAAAT AA
|
|---|
| Protein sequence | MTSPNQTVLC KYRYDPLDRL ASSSPAGQAD VQRFYQKNRL ATEIEGASRR TVFQHEDLLL
AQQRRVEGAI ETTLLATDQQ RSVLRLVDKF GVEPVAYSAY GHHPAESGLT SLLGFNGERR
DPVTGHYLLG NGYRAYNPVL MRFNSPDSLS PFDEGGLNAY GYCGGDPVGV VDPSGHMPFS
ILIQAADMIE KFGPQAATLI AQRALQGVSP AARVLGGKHT PAAVPSLVSK KASKLPSASA
SASASTSTSS AKSVSRRRLT EQRRMLELKR KNLINELSTR LPIDESSAKR RYERFEGRVR
DAEYLIKHYT ENPERVKHSI INPSQSRELF GAKLVNAETN FNAYRKKYIE KFGEYVRDPP
KDK
|
|---|
| |