Gene Psyr_4870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4870 
Symbol 
ID3370420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5780858 
End bp5781937 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content53% 
IMG OID637655237 
Producthypothetical protein 
Protein accessionYP_237935 
Protein GI66048094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCTC TCGACCCGAT AATGCTGTGC ACGTATCGCT ACGACGCGCT GGACCGTCTG 
GCCTCCAGCT CGCCGGTTGG GCGGGCGGAT GTGCAGCGCT TCTATCAAAA GAACCGCCTG
GCGACCGAAA TAGAGGGTGC ATCACGACGC ACGGTCTTTC AGCATGAAGA CCTGTTATTG
GCTCAGCAGC GGCATGTTGA TGGTGTGGTG GACACGACGC TGCTTGCGAC GGATCAGCAA
CGTTCTGTCC TGCGGCTTGT GGATGAGGCC GGGATTGAGC CTGTGGCTTA CAGCCCCTAC
GGTCACCATC CGGCTGAAAG TGGCTTGACC AGTTTGCTGG GGTTTAACGG CGAACGACGC
GATCCGGTGA CTGGGCATTA CCTGCTGGGG AATGGGTATC GGGCTTATAA CCCGGTGTTG
ATGCGGTTCA ACAGCCCGGA CAGTTTGAGT CCGTTTGATG AGGGCGGGTT GAATGCGTAT
GGGTATTGTG GGGGTGATCC GATTGGGTTT GTGGATCCGT CAGGGCATGC GCCGTATAAC
AGGCTACTCA GACGGGCACT AGAAAACGCA CGCTTGAAAT CACCTAGCCG GAAAGATCGA
ATATCTACCC GTTTGTTGAG GGTGCTTGGC AAACGCTCAG AAGCGCCTCC TTCACGGGAA
GGCAAGCCTT TACCCATATC ACCCCTGGCA TCAACGAGCG CTGCCTCATC TCCTCCACCC
TCGACGACCT CAACTCTGCA AGCTCCTGAT AAAGGTAGGC CGGCGATGAC CACTCCAGCC
ATGACCTGGG AGTATAGGGT GAAGAAGGCT GAGGAGTTTC ATCATCCAGT GAGCACGGCG
GTGCCTACGG ACTTTGAAGT GGCCAAAATC TATTTGGAGC GGCACCTTAA AAGACTGCTG
GACGTAGAAA ATACCATACT TTTTTATAAA TCCAATCGGG CTGTAGATAC CGGGAATTTT
ATAGAGGCTG GCCCGTCGCA GTTTTATAAA GCTATCCTGT TGAGAGATAT TAATACTTTT
AAAATATATG CGGCTGGTAT GTCTAGAAAA CACCGTAAGG CTATACGTAA ACAGCGTTAA
 
Protein sequence
MASLDPIMLC TYRYDALDRL ASSSPVGRAD VQRFYQKNRL ATEIEGASRR TVFQHEDLLL 
AQQRHVDGVV DTTLLATDQQ RSVLRLVDEA GIEPVAYSPY GHHPAESGLT SLLGFNGERR
DPVTGHYLLG NGYRAYNPVL MRFNSPDSLS PFDEGGLNAY GYCGGDPIGF VDPSGHAPYN
RLLRRALENA RLKSPSRKDR ISTRLLRVLG KRSEAPPSRE GKPLPISPLA STSAASSPPP
STTSTLQAPD KGRPAMTTPA MTWEYRVKKA EEFHHPVSTA VPTDFEVAKI YLERHLKRLL
DVENTILFYK SNRAVDTGNF IEAGPSQFYK AILLRDINTF KIYAAGMSRK HRKAIRKQR