Gene Psyr_4860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4860 
Symbol 
ID3370410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5767943 
End bp5768749 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content54% 
IMG OID637655227 
Productintegrase catalytic subunit 
Protein accessionYP_237925 
Protein GI66048084 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.434054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCCC TTCTGACGCT GGCGGGCCTG GCGCGCAGCA CGTTTTACTA TCAGGCTCAG 
GTGCAATCCA GACCCGATCC AGATGCAGCT CTGAAGCAGG AGATAGAGCG TGTTTATCAC
GAGGAGAGAG GTCTTTATGG GGCTCGGCGT ATCACGGCGG TCATTCGCAA CTCAGGCACG
TTGATCAACA AGAAGGTTGT GGAGCGCTTG ATGGCTGAAC TGGGCCTCAG ATCAGTTGTG
CGACCCAAGA AGTACCGCTC CTATAAGGGC ACCGTCGGGA AAATTGCGCC GAATTTGCTG
GAGCGCAAGT TCACGGCGCA ACGCCCGAAC CAGAAATGGG TGACCGATGT GACCGAGTTT
AAAGTGGCCA ATCGAAAGCT GTATCTCTCG CCCGTGATGG ACCTGTACAA CGGTGAGATC
GTGGCGTACG AAGTGTCTAC CAGGCCGTGC TTCGAGCTGG TCACCAATAT GCTGGACAAG
GCTCTCCAGC AGTTGCAGGA CGAGCCGAAG CTTGTGATGC ACTCGGATCA GGGCTGGCAG
TATCAACACG CGCAGTACCG TCAAAAGCTG GCGGTAAAGG GCGTGAAGCA AAGCATGTCG
CGTAAGGGAA ATTGCCTGGA CAATGCCGCA ATGGAAAGCT TCTTTGGTAC GCTGAAGTCC
GAGTTTTTCT ATTTGAAACG ATTTGAAAGC ATAGAAGAGC TGAAGGCAGG TCTGGATGAG
TACATCCGCT ACTACAACAA TGACCGCATC AAGCTGAAGC TAAACGGCTT GAGCCCCGTA
AAATACAGGG CTCAGGCGGC AAGCTAA
 
Protein sequence
MCALLTLAGL ARSTFYYQAQ VQSRPDPDAA LKQEIERVYH EERGLYGARR ITAVIRNSGT 
LINKKVVERL MAELGLRSVV RPKKYRSYKG TVGKIAPNLL ERKFTAQRPN QKWVTDVTEF
KVANRKLYLS PVMDLYNGEI VAYEVSTRPC FELVTNMLDK ALQQLQDEPK LVMHSDQGWQ
YQHAQYRQKL AVKGVKQSMS RKGNCLDNAA MESFFGTLKS EFFYLKRFES IEELKAGLDE
YIRYYNNDRI KLKLNGLSPV KYRAQAAS