| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4857 |
|---|
| Symbol | |
|---|
| ID | 3370407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5763056 |
|---|
| End bp | 5763997 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637655224 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_237922 |
|---|
| Protein GI | 66048081 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.694232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA CGTTTGACCC CGATAACCTG CGTGCCAGCC TGCTGCCGCT GAGCGTTATT
GACCCGCTTT CCATGGAGGG ACTGGCCTAT CAGCGCTTTT ACGGTCTTGC CGGACTGTGT
GGCGAAAACG TCATACGCAG CTGGCTGGGG CGCCTCGATG TGGCGGGCTA CGAGGTGGTC
GGGCAGGTAT GGCTGCCTGA CAGCCCGGTC GCCACGCTGT TTCTGTTTCA CGGCTTCTAT
GACCACATGG GACTGTACCG GCATGTGATC GAATGGGCTC TGGAGCAGCG CTTTGCGGTG
ATCGCCTGCG ACCTGCCGGG GCATGGTCTG TCGAGCGGCA GTCGTGCCTG CATCAATGAC
TTCGCAGAGT ACCAGCTGGT GTTGCAACGC CTGCTGCTCG AAGCCGAAGG CCTCGGGCTA
CCACATCCCT GGCACCTGTG CGGACAAAGC ATGGGCGGTG CCATCGTGAC GGATCACCTG
CTTCATCAGG GCGCAGACTC GCCCGCGCAG GGCGAGGTGA TCCTGCTGGC GCCGCTGGTC
AGGCCGCGTG CCTGGGGCTG GTCGCGTCTG AGTTATCACC TGCTCAGACC GTTCGTGAAC
GGCATTGCCC GCCGTTTCAC CGAAAACTCC AATGCGCCCG CGTTCCTGCC GTTTCTGATG
GCCGATCCGT TACAGCCGCT GCGACTGCCC ACGGCCTGGG TCGGCGCGCT GGCGCAATGG
ATCGTGCGTG TTGAAAGTGC GCCGCGCAGC CTGCGCAGCC CGCTGATCAT CCAGGGCGAG
GCGGACATGA CGGTCGACTG GTCGCACAAT CTGGCGATTC TGAAAGACAA GTTCAGCCAG
CCGCAGATTC TGATGCTCGG GCACGCCCGG CATCATCTGG CCAACGAAAC GCCCGAGCTG
CGGGCTCGGT ACTTTGATTT TCTGAAAGGG CGCTTGCGTT AG
|
|---|
| Protein sequence | MSATFDPDNL RASLLPLSVI DPLSMEGLAY QRFYGLAGLC GENVIRSWLG RLDVAGYEVV
GQVWLPDSPV ATLFLFHGFY DHMGLYRHVI EWALEQRFAV IACDLPGHGL SSGSRACIND
FAEYQLVLQR LLLEAEGLGL PHPWHLCGQS MGGAIVTDHL LHQGADSPAQ GEVILLAPLV
RPRAWGWSRL SYHLLRPFVN GIARRFTENS NAPAFLPFLM ADPLQPLRLP TAWVGALAQW
IVRVESAPRS LRSPLIIQGE ADMTVDWSHN LAILKDKFSQ PQILMLGHAR HHLANETPEL
RARYFDFLKG RLR
|
|---|
| |