Gene Psyr_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4843 
Symbol 
ID3370393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5750022 
End bp5750501 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content56% 
IMG OID637655210 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_237908 
Protein GI66048067 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACC CCGATGGTTT CCGTCCTAAT GTCGGGATTA TTCTGACAAA CGATGCTGGT 
CAGGTCCTAT GGGCTCGGCG TATTAACCAG GATGCCTGGC AGTTTCCTCA AGGGGGTATC
AACCCGCAGG AGACGCCGGA AGACGCGCTT TATCGCGAAT TGAATGAAGA AGTCGGTCTG
GAACGACATG ATGTGCAAAT ACTTGCCTGC ACTCGGGGCT GGTTGCGCTA TCGTCTGCCG
CAAAGACTGG TCCGTACCCA CAGCCAGCCG CTGTGTATCG GCCAGAAGCA AAAATGGTTT
CTCCTGCGCC TGATCTCCAA CGAGCAGCGG GTGCGGATGG ATTTGACCGG TAAACCGGAG
TTCGATGGCT GGCGCTGGGT CAGTTATTGG TATCCGTTAG GCCAGGTGGT GACATTCAAG
CGCGAGGTGT ATCGACGCGC ACTCAAAGAG CTTGCCCCGC GCCTCTTATC GCGCGACTGA
 
Protein sequence
MIDPDGFRPN VGIILTNDAG QVLWARRINQ DAWQFPQGGI NPQETPEDAL YRELNEEVGL 
ERHDVQILAC TRGWLRYRLP QRLVRTHSQP LCIGQKQKWF LLRLISNEQR VRMDLTGKPE
FDGWRWVSYW YPLGQVVTFK REVYRRALKE LAPRLLSRD