Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4832 |
Symbol | |
ID | 3370382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5734563 |
End bp | 5736104 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637655199 |
Product | histidine ammonia-lyase |
Protein accession | YP_237897 |
Protein GI | 66048056 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGAG CAGAACAGAT CGTCATCGGT GAAGCACCTG CGGGCTGGCA GGACGTGGTC GCCGTGGCTC GACATGGCGC AAGACTGGTC CTGTCGGACG CCGCCTGGGC ACGGATCGAC AACGCTCAGG CCATCGTGCA GCGCATCGTC GTCAGCGGCG AGCGCGCCTA TGGCGTGAAC ACCGGGCTCG GCGCGCTGTG CAATGTGTCA CTGCAAGGCG AACAGCTCAG TCGCCTGTCG CGCAATACCC TGCTCAGCCA TGCCTGCGGC GTCGGTACGC CACTGGCCGA CGAGCAGACC CGCGCAATCA TCTGCGCCGC GATTCTCAAC TACAGCCAGG GCAAGTCCGG CATTCACCGG CAAGTGGTCG AAGCGCTGCT GGCCTTGCTC AACCGCGGCA TCACGCCGCA AGTACCGGCG CAGGGCTCGG TGGGTTATCT GACGCACATG GCGCACGTCG GTGTTGCGTT GCTGGGCATC GGTCAGGTCA GCTATCGCGG GCAGATCGTC CCGGCTGAGC AGGCCTTGAA CGAAGAGGGT CTGGTTCCGG TCATCCTCGG AGCCAAGGAC GGTTTGTGTC TGGTCAACGG CACACCGTGC ATGACCGGCC TGAGCTGTCT GGCCATCGCT GATGCCGAGC GCCTGAGCCA ATGGGCCGAC GTGATCGGCG CGATGAGCTT CGAAGCCCTG CGCGGCCAGC TGGACGCATT CGATGCAAGC ATTCTCGCCC TCAAGCCGCA TCCGGGCATG CAGCAGGTGG GCAAGAACCT GCGCATGTTG TTGGCAGGCA GCGACGTGCT CGCCAGCAGT GAAGGCATTC GCACTCAAGA TGCGCTGAGT ATCCGTTCGA TTCCCCAGGT GCATGGTGCC ACCCGCGACC AGTTGGCTCA CGCCACTCGG CAGGTCGAGA TCGAGCTCAA TTCAGTCACC GATAACCCGC TGCTGCTCGG CACGCCCGAG GCTTTCCGCG TGGTGTCCCA GGCCAATCCA CACGGCCAGT CGGTGGCCAT GGCGGCAGAC CTGCTGTGCA TGGCGATGGC CGAGCTGGGC TCGATCGCCG AACGACGCCT CGACCGCCTG ATCAACCCGA TGGTCAGCGG CCTGCCGGCG TTTCTGGTCA CCCAGCCGGG CGTCAACTCG GGAATGATGA TCGTCCAGTA CGTCGCCGCT TCGCTGTGCG CGGAAAACCG CCAGATGGCG CAACCGGCCG TGGTCGACAA CTACGTGACC TCCGGTCTGC AGGAGGATCA CCTGAGCCTG GGCACCAGCG CCGCGCTCAA GCTGCACAAG GTGCTGGGCA ATACCACGCA GATTCTGGCC ATCGAGTATC TGCTCGCGGC CCAGGCGTTC GAATTTCTCA AGACACAGGG TTTTGGCGTG GGCACCGGTG CCGCGTGGCG ACTGCTGCGC GAGCGCATTC CGGCCTACGA CGAAGACCGC TGGCTGGCCC CGGACATCGC CAGCAGCGCG GCCCTGCTCA AAGACGAAAC GTCGCTGGAA AGGGTTTTCC AGCACTGCCG TGACAACGCG GCAGGCCTAT AA
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Protein sequence | MSRAEQIVIG EAPAGWQDVV AVARHGARLV LSDAAWARID NAQAIVQRIV VSGERAYGVN TGLGALCNVS LQGEQLSRLS RNTLLSHACG VGTPLADEQT RAIICAAILN YSQGKSGIHR QVVEALLALL NRGITPQVPA QGSVGYLTHM AHVGVALLGI GQVSYRGQIV PAEQALNEEG LVPVILGAKD GLCLVNGTPC MTGLSCLAIA DAERLSQWAD VIGAMSFEAL RGQLDAFDAS ILALKPHPGM QQVGKNLRML LAGSDVLASS EGIRTQDALS IRSIPQVHGA TRDQLAHATR QVEIELNSVT DNPLLLGTPE AFRVVSQANP HGQSVAMAAD LLCMAMAELG SIAERRLDRL INPMVSGLPA FLVTQPGVNS GMMIVQYVAA SLCAENRQMA QPAVVDNYVT SGLQEDHLSL GTSAALKLHK VLGNTTQILA IEYLLAAQAF EFLKTQGFGV GTGAAWRLLR ERIPAYDEDR WLAPDIASSA ALLKDETSLE RVFQHCRDNA AGL
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