Gene Psyr_4832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4832 
Symbol 
ID3370382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5734563 
End bp5736104 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content65% 
IMG OID637655199 
Producthistidine ammonia-lyase 
Protein accessionYP_237897 
Protein GI66048056 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGAG CAGAACAGAT CGTCATCGGT GAAGCACCTG CGGGCTGGCA GGACGTGGTC 
GCCGTGGCTC GACATGGCGC AAGACTGGTC CTGTCGGACG CCGCCTGGGC ACGGATCGAC
AACGCTCAGG CCATCGTGCA GCGCATCGTC GTCAGCGGCG AGCGCGCCTA TGGCGTGAAC
ACCGGGCTCG GCGCGCTGTG CAATGTGTCA CTGCAAGGCG AACAGCTCAG TCGCCTGTCG
CGCAATACCC TGCTCAGCCA TGCCTGCGGC GTCGGTACGC CACTGGCCGA CGAGCAGACC
CGCGCAATCA TCTGCGCCGC GATTCTCAAC TACAGCCAGG GCAAGTCCGG CATTCACCGG
CAAGTGGTCG AAGCGCTGCT GGCCTTGCTC AACCGCGGCA TCACGCCGCA AGTACCGGCG
CAGGGCTCGG TGGGTTATCT GACGCACATG GCGCACGTCG GTGTTGCGTT GCTGGGCATC
GGTCAGGTCA GCTATCGCGG GCAGATCGTC CCGGCTGAGC AGGCCTTGAA CGAAGAGGGT
CTGGTTCCGG TCATCCTCGG AGCCAAGGAC GGTTTGTGTC TGGTCAACGG CACACCGTGC
ATGACCGGCC TGAGCTGTCT GGCCATCGCT GATGCCGAGC GCCTGAGCCA ATGGGCCGAC
GTGATCGGCG CGATGAGCTT CGAAGCCCTG CGCGGCCAGC TGGACGCATT CGATGCAAGC
ATTCTCGCCC TCAAGCCGCA TCCGGGCATG CAGCAGGTGG GCAAGAACCT GCGCATGTTG
TTGGCAGGCA GCGACGTGCT CGCCAGCAGT GAAGGCATTC GCACTCAAGA TGCGCTGAGT
ATCCGTTCGA TTCCCCAGGT GCATGGTGCC ACCCGCGACC AGTTGGCTCA CGCCACTCGG
CAGGTCGAGA TCGAGCTCAA TTCAGTCACC GATAACCCGC TGCTGCTCGG CACGCCCGAG
GCTTTCCGCG TGGTGTCCCA GGCCAATCCA CACGGCCAGT CGGTGGCCAT GGCGGCAGAC
CTGCTGTGCA TGGCGATGGC CGAGCTGGGC TCGATCGCCG AACGACGCCT CGACCGCCTG
ATCAACCCGA TGGTCAGCGG CCTGCCGGCG TTTCTGGTCA CCCAGCCGGG CGTCAACTCG
GGAATGATGA TCGTCCAGTA CGTCGCCGCT TCGCTGTGCG CGGAAAACCG CCAGATGGCG
CAACCGGCCG TGGTCGACAA CTACGTGACC TCCGGTCTGC AGGAGGATCA CCTGAGCCTG
GGCACCAGCG CCGCGCTCAA GCTGCACAAG GTGCTGGGCA ATACCACGCA GATTCTGGCC
ATCGAGTATC TGCTCGCGGC CCAGGCGTTC GAATTTCTCA AGACACAGGG TTTTGGCGTG
GGCACCGGTG CCGCGTGGCG ACTGCTGCGC GAGCGCATTC CGGCCTACGA CGAAGACCGC
TGGCTGGCCC CGGACATCGC CAGCAGCGCG GCCCTGCTCA AAGACGAAAC GTCGCTGGAA
AGGGTTTTCC AGCACTGCCG TGACAACGCG GCAGGCCTAT AA
 
Protein sequence
MSRAEQIVIG EAPAGWQDVV AVARHGARLV LSDAAWARID NAQAIVQRIV VSGERAYGVN 
TGLGALCNVS LQGEQLSRLS RNTLLSHACG VGTPLADEQT RAIICAAILN YSQGKSGIHR
QVVEALLALL NRGITPQVPA QGSVGYLTHM AHVGVALLGI GQVSYRGQIV PAEQALNEEG
LVPVILGAKD GLCLVNGTPC MTGLSCLAIA DAERLSQWAD VIGAMSFEAL RGQLDAFDAS
ILALKPHPGM QQVGKNLRML LAGSDVLASS EGIRTQDALS IRSIPQVHGA TRDQLAHATR
QVEIELNSVT DNPLLLGTPE AFRVVSQANP HGQSVAMAAD LLCMAMAELG SIAERRLDRL
INPMVSGLPA FLVTQPGVNS GMMIVQYVAA SLCAENRQMA QPAVVDNYVT SGLQEDHLSL
GTSAALKLHK VLGNTTQILA IEYLLAAQAF EFLKTQGFGV GTGAAWRLLR ERIPAYDEDR
WLAPDIASSA ALLKDETSLE RVFQHCRDNA AGL