Gene Psyr_4828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4828 
Symbol 
ID3370378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5730019 
End bp5731716 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content63% 
IMG OID637655195 
Producturocanate hydratase 
Protein accessionYP_237893 
Protein GI66048052 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGA ATAATCAACA CCTGAAGCAG GACTGGACCC GCCATCGCGA AGGCGTCGTA 
CGGGCTGCAC GCGGTACTCA ATTGACTGCC AAGAGCTGGC TGACCGAAGC GCCGCTACGC
ATGTTGATGA ACAATCTCGA CCCGGAAGTC GCCGAAAACC CCAATGAGCT GGTGGTTTAC
GGCGGCATCG GCCGCGCCGC GCGCAACTGG GAGTGCTACG ACAAGATCGT CGAGAGCCTC
ACTCAGCTCA ACGATGATGA AACCCTGCTG GTACAGTCCG GCAAGCCGGT CGGCGTGTTC
AAGACCCACA GCAACGCCCC TCGCGTATTG ATCGCCAACT CCAACCTGGT ACCGCACTGG
GCCAGTTGGG AGCACTTCAA CGAACTGGAT GCCAAGGGCC TGGCCATGTA TGGCCAGATG
ACCGCCGGCA GCTGGATCTA CATCGGCAGC CAGGGCATCG TGCAAGGCAC TTACGAAACC
TTCGTCGAAG CCGGTCGCCA GCACTATGAC GGCAACCTCA AGGGCCGCTG GGTGCTCACC
GCAGGTCTGG GCGGCATGGG TGGCGCGCAG CCGCTGGCCG CGACATTGGC CGGGGCCTGC
TCGCTGAACA TAGAATGCCA GCAGAGCCGC ATCGATTTCC GCATCAAGAC CCGCTACGTT
GACGAACAGG CCGCAGATCT CGATGACGCA CTGGCGCGTA TCGCCAAATA CACGGCCGAA
GGCAAAGCCA TCTCCATCGC GCTGTGTGGC AACGCGGCGG AAATCCTGCC GGAAATGGTC
CGTCGCGGTG TGCGCCCGGA CATGGTCACC GACCAGACCA GCGCCCACGA CCCGCTCAAT
GGTTACCTGC CCAAAGGCTG GACCTGGGAC GAGTACCGTG CCCGTTCGGT GAGCGAACCG
GCCAGTGTGG TCAAGGCCGC CAAGCAGTCG ATGGCCGAGC ACGTCGAAGC CATGCTCGCC
TTCCAGCAAG CCGGCATTCC GACCTTCGAC TACGGCAACA ATATTCGTCA GATGGCCAAG
GAAGTCGGCG TCACCAATGC CTTCGATTTT CCGGGCTTCG TGCCGGCCTA TATCCGTCCG
CTGTTCTGCC GTGGCATCGG GCCGTTCCGC TGGGCCGCGC TGTCGGGCGA CCCGCAGGAC
ATCTACAAGA CCGACGCCAA AGTCAAAGAG CTGATCCCGG ACGACGAGCA CCTGCACAAC
TGGCTGGACA TGGCCCGCGA GCGCATCAGC TTCCAGGGCC TGCCGGCGCG TATCTGCTGG
GTCGGCCTGG GTCAACGCGC CAGACTGGGT CTGGCCTTCA ACGAAATGGT CCGCAGTGGC
GAGTTGTCGG CACCGGTGGT GATCGGTCGC GACCACCTGG ACTCCGGCTC GGTCGCCAGC
CCCAACCGCG AAACCGAATC CATGCGTGAC GGCTCCGACG CTGTTTCCGA CTGGCCGCTG
CTCAATGCTC TGCTCAACAC CGCCAGCGGT GCGACCTGGG TCTCGCTGCA CCACGGTGGC
GGCGTCGGCA TGGGCTTCTC GCAGCATTCC GGGATGGTAA TCGTCTGCGA CGGCACGGAC
GAAGCCGCCG AGCGTATTGC CCGCGTGCTG CATAACGACC CGGCCACCGG GGTGATGCGC
CATGCCGATG CCGGTTACGA CATCGCTATC GACTGTGCCA GAGAGCAGGG CTTGAACCTG
CCAATGATCG GACGTTGA
 
Protein sequence
MTENNQHLKQ DWTRHREGVV RAARGTQLTA KSWLTEAPLR MLMNNLDPEV AENPNELVVY 
GGIGRAARNW ECYDKIVESL TQLNDDETLL VQSGKPVGVF KTHSNAPRVL IANSNLVPHW
ASWEHFNELD AKGLAMYGQM TAGSWIYIGS QGIVQGTYET FVEAGRQHYD GNLKGRWVLT
AGLGGMGGAQ PLAATLAGAC SLNIECQQSR IDFRIKTRYV DEQAADLDDA LARIAKYTAE
GKAISIALCG NAAEILPEMV RRGVRPDMVT DQTSAHDPLN GYLPKGWTWD EYRARSVSEP
ASVVKAAKQS MAEHVEAMLA FQQAGIPTFD YGNNIRQMAK EVGVTNAFDF PGFVPAYIRP
LFCRGIGPFR WAALSGDPQD IYKTDAKVKE LIPDDEHLHN WLDMARERIS FQGLPARICW
VGLGQRARLG LAFNEMVRSG ELSAPVVIGR DHLDSGSVAS PNRETESMRD GSDAVSDWPL
LNALLNTASG ATWVSLHHGG GVGMGFSQHS GMVIVCDGTD EAAERIARVL HNDPATGVMR
HADAGYDIAI DCAREQGLNL PMIGR