Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4826 |
Symbol | |
ID | 3370376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5724105 |
End bp | 5726372 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637655193 |
Product | TonB-dependent receptor:TonB box, N-terminal |
Protein accession | YP_237891 |
Protein GI | 66048050 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACAA CAGGTGGGGA TAGCGTCAGA CACACGCTTC TGGCGCAGGC GATCGATCAG GCTCATACCG CGCGGGGGCG TCGTTGTGGG TGGTTGCTGA TGGGGCTGAC GGCATTGCCG TGTGTTCCGG CCATGGCAGA GACAGCGGCA GGGCAGAACA CGGAAACGGT AGCGCTGGAA TCGGTGACCG TGACCGCCAC ACGCCGCGAG GAATCGCTGC AGAAAGTACC GGTCGCCGTG TCCGTGATCG AGGGCGAACA GCTGGAGCGC GATAACCGTA ACGGCGTGGC CAGCATCGTG CAGCAGGTGC CGTCGTTGAA TTTCCGCACC GGGGCTTCCA ACAAGGACAC TTCGCTGTTC GTTCGCGGTG TCGGCACCAT TTCCACCTCG CCAGGCGTCG AACCGACCGT GGCCACGGTG ATCGATGGCG TGGTGTATGC GCGGCCGGGT CAGGCCACGC TGGACTTACT CGACCTGGAA CGCATCGAAG TACTGCGCGG CCCGCAAGGC ACGCTGTTCG GCAAGAATGC TTCGGCGGGC GTGCTCAACG TCACCACCAA GGCACCGACT GAAGCGACTC ACGGTTACAT CGATCAGTCC TATTACAGCG GCAACGAAAG CCGCACCCGT TTCGGCATTG GCGGCAGCCT GATTCCGCAG ACCCTCAAAG GCTCGATCAC GACGTTGTTC GGCAGCTATG ACGGCAATGT CGACAACAAA CTCAATGGTC AGGAGGTCAA CGGTTACAAC CGCAAGGGTG CCCGCGGCAA GCTGGAATTC ACACCCAATG ACGACATCAC CTTCACCCTT GCAGCGGACT ACATGCAGTC CCATGACGAT GCACCCAACG GTGTCGTAAC CAAGGCGCTG ACCCCGTCCT TCGCCAGTGC CCTGACGCCG GTACGTGCCG ACAGCGATAA CCGCAATGTC GTCAGCGATT ACCGCAGCCA TGTCGAGGAC GTCAACAAAG GCCTGTCCGG CCAGCTCGAC TGGCAACTGG GCGACTACAC CCTGACCTCG ATTACCGCCT GGCGTGGTTG GGATAACACC CAGTATCAGG ACGGCGACCG GCTTGGCACT GTCACCGCGG CGTTCCCCGG CACCGAAGAC AAGGGCGATC TGGCGTTCAA CCAGTATTCC CAGGAGTTGC GTCTGGCGTC GCCGAAAGGC CGGTTTGTCG AGTACGTCGG CGGGCTGTTT TACATGCACG GCAAGAGCGA CGAGACCTAT CAGCGCACGC TGATCACACC GACGACTCAT GATCGCGGCA TCGCCGATTA CAGCACCACC ACCGACAGTT ATTCGGTGTT CGGTGAAACC ACGTTCAACT TCACCCCGGA CTTGCGTGCG ATTGCCGGGG CACGCTGGAC CCACGACGAC CTGGAATACG ATCATCGCCG CGTATCGACA TCGGCTACCA CCGTCAGCGG CATTCAGCCA GCAACCAGCA GCTCCGGGTC GGTGGATGAA GACGGCAAGT CCGGACGCCT CGGTTTGCAG TACGACCTGA GCGACAGTGT GATGACCTAC ATCACCTACT CGCGCGGCTA CAAAGGCCCG GCCTACAACG TGTTCTTCAA CATGCAGCCG CGTGACACCG AGGCGCTCAA GCCGGAAACC TCGAACACCT GGGAGGTCGG CCTCAAGGCC ACCACCTGGA ACAATCGCCT GACCACCAAC CTGGCGGTGT TCCACAGCGA GTACGACAAC TATCAGGCGA ATTTCTTCGA CAGTGTCGCC GGACAGGTCG TGACGCGCCT GATCAACGCA GGCAGCGTCA GCACGGAAGG CGTCGAGCTG GATTACGCCC TGCAAGCCAC CCGAAACCTG AAATTCTCCG GTGCGCTGTC CTACACCAAA GCACGCATCG ACAGCTTCGC CTGCCCGGCC GGTGCGGCGG CGTCCTGCAA TGTCGACGGC AAGACCCTGC CGTACAGCCC GGACTGGAAA AGCTACGTTC GTGCCGATTA CACCATCCCG CTGGACAACG GCCTGGATAT CGAACTGGGC ACCGATTACA GCTGGCAGAG CGAAGTGCAG TACGACATCA GCCAGAACCC GGACACCAGA CAGGGTGCTT ACGGCATCTG GAACGCCAGC GTGGCACTGG CCGATTACAA CAGTGGCTGG CGCGTTGCAT TGCTGGGCAA GAACCTGGCG GACAAGTCCT ACTCGCCAAT GCTGGCGACC GGGGGCAACT ACGTTTATCG ATCAGTGCCG CGTGATGATG AACGTTATTT CGGCGTGCAG TTGCGCAAGG ATTTTTGA
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Protein sequence | MHTTGGDSVR HTLLAQAIDQ AHTARGRRCG WLLMGLTALP CVPAMAETAA GQNTETVALE SVTVTATRRE ESLQKVPVAV SVIEGEQLER DNRNGVASIV QQVPSLNFRT GASNKDTSLF VRGVGTISTS PGVEPTVATV IDGVVYARPG QATLDLLDLE RIEVLRGPQG TLFGKNASAG VLNVTTKAPT EATHGYIDQS YYSGNESRTR FGIGGSLIPQ TLKGSITTLF GSYDGNVDNK LNGQEVNGYN RKGARGKLEF TPNDDITFTL AADYMQSHDD APNGVVTKAL TPSFASALTP VRADSDNRNV VSDYRSHVED VNKGLSGQLD WQLGDYTLTS ITAWRGWDNT QYQDGDRLGT VTAAFPGTED KGDLAFNQYS QELRLASPKG RFVEYVGGLF YMHGKSDETY QRTLITPTTH DRGIADYSTT TDSYSVFGET TFNFTPDLRA IAGARWTHDD LEYDHRRVST SATTVSGIQP ATSSSGSVDE DGKSGRLGLQ YDLSDSVMTY ITYSRGYKGP AYNVFFNMQP RDTEALKPET SNTWEVGLKA TTWNNRLTTN LAVFHSEYDN YQANFFDSVA GQVVTRLINA GSVSTEGVEL DYALQATRNL KFSGALSYTK ARIDSFACPA GAAASCNVDG KTLPYSPDWK SYVRADYTIP LDNGLDIELG TDYSWQSEVQ YDISQNPDTR QGAYGIWNAS VALADYNSGW RVALLGKNLA DKSYSPMLAT GGNYVYRSVP RDDERYFGVQ LRKDF
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