Gene Psyr_4821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4821 
Symbol 
ID3370371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5717771 
End bp5718856 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content59% 
IMG OID637655188 
Productsensor histidine kinase 
Protein accessionYP_237886 
Protein GI66048045 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCA GCGATGCGCT GCACAGACTG TTACTGGATA ACCTGACCAC TGCCACCATT 
CTGCTCAACG CCGACCTGCG ACTTGAGTAC ATGAACCCGG CGGCGGAAAT GCTGCTGGCC
ATCAGCGGGC AGCGCAGCCA TGGGCAATTC ATCAGCGAGC TGTTCACCGA GTCGGCCGAA
GCATTGAGTT CGCTGCGTCA GGCAGTCGAA CAGGCTCATC CTTTTACCAA GCGCGAAGCG
ATGCTCACTG CACTGACCGG CCAGACCCTG ACGGTCGACT ACGCGGTGAC GCCTATCCTT
AGCAAGGGCG ATACCCTGCT GCTGCTTGAA GTGCATCCGC GTGACCGGCT GTTGCGTATC
ACCAAGGAAG AGGCTCAGCT GTCCAAGCAG GAAACCACCA AGATGCTGGT GCGTGGCCTG
GCTCACGAGA TCAAGAATCC ACTGGGCGGC ATTCGCGGGG CCGCACAATT GCTGGCCCGC
GAGCTGCCTG AAGAAAGCCT CAAGGACTAC ACCAACGTCA TTATCGAAGA GGCCGACCGC
CTGCGTAATC TGGTCGACCG CATGCTCGGC TCCAACAAGC TGCCATCGCT GGCGATGACC
AACGTGCACG AAGTGCTGGA GCGCGTGTGC AGCCTGGTCG AGGCCGAAAG CCAGGGTTGC
ATTACCTTGG TGCGCGACTA CGACCCAAGC ATCCCGGACG TGTTGATCGA CCGCGAGCAA
ATGATCCAGG CGGTGCTCAA TATCGTGCGC AACGCCATGC AGGCCATCAG CGGCCAGAAC
GAGTTGCGCC TTGGCCGGAT CACCCTGCGT ACCCGCGCCA TGCGCCAGTT CACCATCGGC
CACGTTCGCC ATCGACTGGT GAGCAAGATC GAAATCATCG ACAACGGCCC CGGTATTCCG
GCCGAACTTC AGGAAACCAT TTTCTATCCG ATGGTCAGTG GCCGCCCGGA TGGCACGGGA
CTAGGTCTTG CCATTACCCA GAACATCATC AGCCAGCACC AGGGTCTGAT CGAGTGTGAC
AGCCATCCCG GCCACACCAC ATTCTCGATC TTCCTGCCGC TGGAACAAGG AGCAGCTTCG
ACATGA
 
Protein sequence
MTISDALHRL LLDNLTTATI LLNADLRLEY MNPAAEMLLA ISGQRSHGQF ISELFTESAE 
ALSSLRQAVE QAHPFTKREA MLTALTGQTL TVDYAVTPIL SKGDTLLLLE VHPRDRLLRI
TKEEAQLSKQ ETTKMLVRGL AHEIKNPLGG IRGAAQLLAR ELPEESLKDY TNVIIEEADR
LRNLVDRMLG SNKLPSLAMT NVHEVLERVC SLVEAESQGC ITLVRDYDPS IPDVLIDREQ
MIQAVLNIVR NAMQAISGQN ELRLGRITLR TRAMRQFTIG HVRHRLVSKI EIIDNGPGIP
AELQETIFYP MVSGRPDGTG LGLAITQNII SQHQGLIECD SHPGHTTFSI FLPLEQGAAS
T