Gene Psyr_4810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4810 
Symbol 
ID3370360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5704737 
End bp5705996 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID637655177 
ProductSodium/hydrogen exchanger 
Protein accessionYP_237875 
Protein GI66048034 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC TCGCTGCTGG TTTTATCTGC CTCACTGCGC TGCTGACCTA CGTGAACTAC 
CGTTTCATCG GCCTGCCGCC CACCATCGGC GTGATGGTCA CCGCGCTGAT GTTCTCGTTG
CTGCTGCAGG GTCTGAGCTT TCTGGGCTAT CCCGGCCTGG AAGATCGCGT TCAACAATTG
ATCGGCCAGA TCGACTTCGG CGACCTGCTG ATGAACTGGA TGCTGTCCTT TCTGCTGTTC
GCCGGGGCGC TGCACGTCAA CCTGGGCGAT TTGAGGAGCT ACCGTTGGCC CATCGGCCTG
TTGGCGACTT TCGGGGTGCT GATTGCCACC ACTGTGATCG GCGCACTGGC CTACTGGATC
TTTGCCCTGT TCGGCTGGCA CGTCAGCCCG TTGTACTGCC TGCTGTTTGG TGCGCTGATC
TCGCCTACCG ATCCGATTGC GGTGCTTGGT GTGTTGCGTA CCGCCAACGC CTCGAAACCG
CTGAAGACCA CGATCGTCGG CGAAAGCCTG TTCAACGACG GCACCGCGGT GGTGGTGTTC
ACCGTGCTGT TGGGTATCGC GCAGTTGGGC GAGACGCCGA CGGTTGGCGA AACCGCTCTG
CTGTTCGTTC ACGAAGCGGT GGGCGGGGTG CTGTTCGGCG GCCTGATCGG TTACGCCGTG
TACCTGATGA TCAAGAGCAT CGAGCAATAT CAGATCGAGG TCATGCTCAC GCTGGCACTG
GTGATCGGCG GCTCGGCGAT GGCGTCTGAA CTGCATGTGT CCGGTCCTAT CGCGATGGTC
GTGGCTGGCC TGATCATCGG CAACCTGGGA CGCAATCTGG CGATGAACGA CATGACCCGT
CGCTACATGG ACGGTTTCTG GGAGTTGCTG GATGACATGC TCAACGCGCT GCTGTTCGCG
CTGATCGGTA TGGAGCTGTT GCTGTTGCCG TTCTCATGGC AGCACCTGAT TGCAGCCAGC
CTGCTGGCGG CGGCGATTCT GCTGTCGCGC TTCGTCACCG TCGCTCCGGC CATCCTGCTC
CTGCGTCGCT GGCGCAAGGT GCCGCACGGC ACGATCCGCA TCCTCACCTG GGGTGGCTTG
CGCGGCGGTG TCTCGGTTGC GCTGGCCCTG GCGCTGCCGA CCGGGCCGGA ACGCGATCTG
CTGCTGAGCA TCACCTACAT CGTGGTGCTG CTGTCGATTC TCTTGCAGGG CCTGACCATC
GGCAAGCTGG TGAATGCCGT CACCCGCGCC CCGCAGGCGA AAGACCCGGC AGAGCATTGA
 
Protein sequence
MLELAAGFIC LTALLTYVNY RFIGLPPTIG VMVTALMFSL LLQGLSFLGY PGLEDRVQQL 
IGQIDFGDLL MNWMLSFLLF AGALHVNLGD LRSYRWPIGL LATFGVLIAT TVIGALAYWI
FALFGWHVSP LYCLLFGALI SPTDPIAVLG VLRTANASKP LKTTIVGESL FNDGTAVVVF
TVLLGIAQLG ETPTVGETAL LFVHEAVGGV LFGGLIGYAV YLMIKSIEQY QIEVMLTLAL
VIGGSAMASE LHVSGPIAMV VAGLIIGNLG RNLAMNDMTR RYMDGFWELL DDMLNALLFA
LIGMELLLLP FSWQHLIAAS LLAAAILLSR FVTVAPAILL LRRWRKVPHG TIRILTWGGL
RGGVSVALAL ALPTGPERDL LLSITYIVVL LSILLQGLTI GKLVNAVTRA PQAKDPAEH