Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4810 |
Symbol | |
ID | 3370360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5704737 |
End bp | 5705996 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637655177 |
Product | Sodium/hydrogen exchanger |
Protein accession | YP_237875 |
Protein GI | 66048034 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAC TCGCTGCTGG TTTTATCTGC CTCACTGCGC TGCTGACCTA CGTGAACTAC CGTTTCATCG GCCTGCCGCC CACCATCGGC GTGATGGTCA CCGCGCTGAT GTTCTCGTTG CTGCTGCAGG GTCTGAGCTT TCTGGGCTAT CCCGGCCTGG AAGATCGCGT TCAACAATTG ATCGGCCAGA TCGACTTCGG CGACCTGCTG ATGAACTGGA TGCTGTCCTT TCTGCTGTTC GCCGGGGCGC TGCACGTCAA CCTGGGCGAT TTGAGGAGCT ACCGTTGGCC CATCGGCCTG TTGGCGACTT TCGGGGTGCT GATTGCCACC ACTGTGATCG GCGCACTGGC CTACTGGATC TTTGCCCTGT TCGGCTGGCA CGTCAGCCCG TTGTACTGCC TGCTGTTTGG TGCGCTGATC TCGCCTACCG ATCCGATTGC GGTGCTTGGT GTGTTGCGTA CCGCCAACGC CTCGAAACCG CTGAAGACCA CGATCGTCGG CGAAAGCCTG TTCAACGACG GCACCGCGGT GGTGGTGTTC ACCGTGCTGT TGGGTATCGC GCAGTTGGGC GAGACGCCGA CGGTTGGCGA AACCGCTCTG CTGTTCGTTC ACGAAGCGGT GGGCGGGGTG CTGTTCGGCG GCCTGATCGG TTACGCCGTG TACCTGATGA TCAAGAGCAT CGAGCAATAT CAGATCGAGG TCATGCTCAC GCTGGCACTG GTGATCGGCG GCTCGGCGAT GGCGTCTGAA CTGCATGTGT CCGGTCCTAT CGCGATGGTC GTGGCTGGCC TGATCATCGG CAACCTGGGA CGCAATCTGG CGATGAACGA CATGACCCGT CGCTACATGG ACGGTTTCTG GGAGTTGCTG GATGACATGC TCAACGCGCT GCTGTTCGCG CTGATCGGTA TGGAGCTGTT GCTGTTGCCG TTCTCATGGC AGCACCTGAT TGCAGCCAGC CTGCTGGCGG CGGCGATTCT GCTGTCGCGC TTCGTCACCG TCGCTCCGGC CATCCTGCTC CTGCGTCGCT GGCGCAAGGT GCCGCACGGC ACGATCCGCA TCCTCACCTG GGGTGGCTTG CGCGGCGGTG TCTCGGTTGC GCTGGCCCTG GCGCTGCCGA CCGGGCCGGA ACGCGATCTG CTGCTGAGCA TCACCTACAT CGTGGTGCTG CTGTCGATTC TCTTGCAGGG CCTGACCATC GGCAAGCTGG TGAATGCCGT CACCCGCGCC CCGCAGGCGA AAGACCCGGC AGAGCATTGA
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Protein sequence | MLELAAGFIC LTALLTYVNY RFIGLPPTIG VMVTALMFSL LLQGLSFLGY PGLEDRVQQL IGQIDFGDLL MNWMLSFLLF AGALHVNLGD LRSYRWPIGL LATFGVLIAT TVIGALAYWI FALFGWHVSP LYCLLFGALI SPTDPIAVLG VLRTANASKP LKTTIVGESL FNDGTAVVVF TVLLGIAQLG ETPTVGETAL LFVHEAVGGV LFGGLIGYAV YLMIKSIEQY QIEVMLTLAL VIGGSAMASE LHVSGPIAMV VAGLIIGNLG RNLAMNDMTR RYMDGFWELL DDMLNALLFA LIGMELLLLP FSWQHLIAAS LLAAAILLSR FVTVAPAILL LRRWRKVPHG TIRILTWGGL RGGVSVALAL ALPTGPERDL LLSITYIVVL LSILLQGLTI GKLVNAVTRA PQAKDPAEH
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