Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4801 |
Symbol | |
ID | 3370351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5690688 |
End bp | 5691914 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637655168 |
Product | Outer membrane efflux protein |
Protein accession | YP_237866 |
Protein GI | 66048025 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00249818 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAGTCG GCGCACTTTG TCTGATGTTG TTACCGTTCA TTGCTCCGGG CATGGCGATG GCCCAGGGCA TCAGTCTGCC TCAGGCACTG GAAGCCGCCT TTGCCCGTAA CCCGGAACTG GCCGCAGCCC AGTGGGAGAT CGGCGTTGCC GAGGGTGATC GCCAGCAGGC TGGACTGATT CCCAACCCGA CAGTGTCATG GGAAGTCGAA GACACCCGCC GCGAGACCAG CACCACCACC GTGATGCTCA GCCAGGCACT GGAACTGGGC GGCAAGCGCG GGGCGCGGAT CGAGGCCGCC AGCAAGGGTC AGGACGCTGC GCGTCTGGAG CTGGAGCGTC GCGGCAACGA GCTGCGTGCC GAGGTGGTTC AGGCGTTCTA CGCAGCGGCG CGGGCACAGG CTGGTCTGGA GCTGGCGCGC CAATCCAGGA CACTGGCCGA ACGCGGCCTT GAGGTTGCCG AAGGGCGAGT CCGGGCGGGT AAGGTATCGC CGGTGGAAGC CACACGCGCC CAAGTGCAAC TGGCTGAAAC CGATCTGCTG GTGCGCCGCG CCGAGACCCT GAAAATCAAC AGCAACCGCG AGCTGGCGCG CACCACCGGT TCGCCGCTCG CCTCTTTCGA ACGTCTGGAC TACAGCGACC TGTCGCCGGG CAAGCTGCCA CCGAGCGCAA AGCTACTGAC CGCCCTCAAT CAGTCCGCCG AGCTGCGCCT GGCGCAGACC CAGATCGAGC AGCGCGAAGC CGCGCTGGGG TCGGAACGCG CCAAGCGCAT CCCCGACCTG ACCGTCAGCG TCGGTAGCCA GTACAGCCGC GAAGAGCGCG AGCGGGTCAA CGTCGTGGGC CTGTCGATGC CGCTGCCGCT GTTCGACCGC AATCAGGGCA ACGTGCTCGC GGCATCACGC CGTGCCGACC AGTCACGCGA CCTGCGCAAC GCCGTCGAAC TGAAGCTGCG CACGCAGACG CAGTCCGCCC TCGATCAATG GACCACCGCC GCGCAGGAAG TCGAGTCCTT TGACCGCGTG ATCCTGCCCG CGGCGCAACG TGCCGTCGAC ACGGCAACGC GCGGTTTCGA GATGGGCAAG TTCGGTTTTC TGGAAGTGCT GGATGCGCAA CGGACGCTGA TTTCGGCGCG CAACCAGTAC CTCGAATCGC TGGCCACCGC CACCGAGGCC AGAGTCGCCA TCGAGCGAAT ACACGGTGAT CTCAACCGCT TCAGCCTCAA CCCCTGA
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Protein sequence | MRVGALCLML LPFIAPGMAM AQGISLPQAL EAAFARNPEL AAAQWEIGVA EGDRQQAGLI PNPTVSWEVE DTRRETSTTT VMLSQALELG GKRGARIEAA SKGQDAARLE LERRGNELRA EVVQAFYAAA RAQAGLELAR QSRTLAERGL EVAEGRVRAG KVSPVEATRA QVQLAETDLL VRRAETLKIN SNRELARTTG SPLASFERLD YSDLSPGKLP PSAKLLTALN QSAELRLAQT QIEQREAALG SERAKRIPDL TVSVGSQYSR EERERVNVVG LSMPLPLFDR NQGNVLAASR RADQSRDLRN AVELKLRTQT QSALDQWTTA AQEVESFDRV ILPAAQRAVD TATRGFEMGK FGFLEVLDAQ RTLISARNQY LESLATATEA RVAIERIHGD LNRFSLNP
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