| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4792 |
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| Symbol | |
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| ID | 3370342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5679468 |
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| End bp | 5681465 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637655159 |
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| Product | transketolase |
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| Protein accession | YP_237857 |
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| Protein GI | 66048016 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00646987 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAAGCC GTCGTGAGCG TGCCAACGCT ATTCGTGCCC TCAGCATGGA TGCCGTGCAA
AAAGCCAACA GCGGCCATCC GGGTGCCCCC ATGGGCATGG CGGATATCGC CGAGGTTCTT
TGGCGCGATT ATCTGAAACA CAACCCGGCA AACCCTTCGT TTGCCGACCG TGACCGTTTC
ATCATGTCCA ACGGCCACGG CTCGATGCTG GTCTATTCGC TGCTGCACCT GACCGGCTAC
GACCTGTCCA TCGACGACCT GAAAAACTTC CGTCAATTGC ACAGCCGTAC ACCGGGCCAC
CCGGAATACG GTTACACGCC TGGCATCGAG ACCACCACCG GTCCGCTGGG TCAGGGCTTT
GCCAACGCTG TCGGTTTCGC TGCTGCCGAG AAGACGCTCG CCGCGCAGTT CAACCGCCCA
GGCCACTCCA TCGTCGATCA CCATACCTAC GTGTTCATGG GTGATGGCTG CATGATGGAA
GGTATTTCCC ACGAAGCGGC CTCGCTGGCC GGTACGTTGC AGTTGAACAA GCTGATCGCG
TTCTACGACG ACAACGGCAT CTCCATCGAT GGCGAAGTGG AAGGCTGGTT TACCGACGAC
ACGCCAAAGC GTTTCGAGTC CTACGGCTGG CTGGTGATCC GCAATGTCGA CGGTCACGAT
CCTGAAGAAA TCAAGACGGC CATCGAGACC GCTCGCAAGA GCGATCAGCC GACGCTGATC
TGCTGCAAGA CCACCATCGG TTTCGGTTCG CCGAACAAAC AGGGCAAGGA AGAGTCCCAC
GGTGCGCCGC TGGGTGCTGA CGAAATCGCC CTGACCCGTG CTGCACTGAA GTGGAACTAC
GGTCCTTTCG AAATCCCGGC TGATATCTAT GCCGAGTGGA ACGGGAAGGA AAAAGGCCTG
GCTGCCGAAG CCGAGTGGGA CCAGCGCTTT GCTGACTATT CCGCCGCGTT CCCGGAACTG
GCCAATGACT TCATTCGTCG CATGAGCGGG CAATTGCCTG CTGATTTTGC TGAAAAATCA
GCGGCTTATG TCGCCGAAGT CAACGCAAAG GGCGAAACCA TCGCCAGCCG CAAGGCCAGC
CAGAACGCGC TGGGTGCACT CGGCCCGTTG CTGCCTGAAA TTCTGGGTGG TTCGGCTGAC
CTTGCCGGGT CCAACCTGAC CATCTGGAAA GGCTGCAAGA GCATCACCGG CGAAGACCCT
AACGGCAACT ACCTGCATTA CGGTGTTCGC GAGTTCGGCA TGGGCGCCAT GATGAACGGC
ATCGCCTTGC ACGGCGGCTT CGTGCCTTAC GGCGCCACCT TCCTGATCTT CATGGAATAC
GCTCGCAACG CGGTGCGTAT GGCCTCGTTG ATGAAGAAGC GCGTGATCTA CGTATTCACC
CACGACTCCA TCGGTCTGGG CGAAGACGGT CCGACTCACC AGCCGATCGA GCAATTGACC
AGTCTGCGTA CCACGCCGAA CCTGGACACC TGGCGTCCTG CGGATGCGGT GGAATCGGCC
GTAGCCTGGA AACACGCGAT CGAGCGTGAC GATGGCCCGT CGGCACTGAT CTTCTCCCGT
CAGAATCTGA CCCATCAGGC GCGTGACGAG AAGCAACTGT CCTACATCGC GCGTGGCGGC
TACGTGCTGC GTGACTGTGC TGCCGAGCCT GAACTGATCC TGATCGCAAC CGGTTCGGAA
GTCGGTCTGG CTGTGCAGGC GTACGACAAG CTGACCGAGC AGGGTCGCAA CGTGCGCGTG
GTGTCCATGC CATGCACCAG CATTTTCGAA GCTCAGGATG CTGCTTACAA GCAGGCGGTG
CTGCCGTTGC AGGTCAGCGC GCGTATTGCC ATCGAAGCGG CTCACGCCGA CTACTGGTAC
AAATACGTTG GCCTGGAAGG GCGCGTGATC GGCATGACTA CCTTCGGCGA GTCGGCCCCT
GCGCCAGCGC TGTTCGAAGA GTTCGGCTTC ACGCTGGAAA ACGTCCTGAG CACTGCTGAA
GAGCTGCTGG AAGACTGA
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| Protein sequence | MPSRRERANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WRDYLKHNPA NPSFADRDRF
IMSNGHGSML VYSLLHLTGY DLSIDDLKNF RQLHSRTPGH PEYGYTPGIE TTTGPLGQGF
ANAVGFAAAE KTLAAQFNRP GHSIVDHHTY VFMGDGCMME GISHEAASLA GTLQLNKLIA
FYDDNGISID GEVEGWFTDD TPKRFESYGW LVIRNVDGHD PEEIKTAIET ARKSDQPTLI
CCKTTIGFGS PNKQGKEESH GAPLGADEIA LTRAALKWNY GPFEIPADIY AEWNGKEKGL
AAEAEWDQRF ADYSAAFPEL ANDFIRRMSG QLPADFAEKS AAYVAEVNAK GETIASRKAS
QNALGALGPL LPEILGGSAD LAGSNLTIWK GCKSITGEDP NGNYLHYGVR EFGMGAMMNG
IALHGGFVPY GATFLIFMEY ARNAVRMASL MKKRVIYVFT HDSIGLGEDG PTHQPIEQLT
SLRTTPNLDT WRPADAVESA VAWKHAIERD DGPSALIFSR QNLTHQARDE KQLSYIARGG
YVLRDCAAEP ELILIATGSE VGLAVQAYDK LTEQGRNVRV VSMPCTSIFE AQDAAYKQAV
LPLQVSARIA IEAAHADYWY KYVGLEGRVI GMTTFGESAP APALFEEFGF TLENVLSTAE
ELLED
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