Gene Psyr_4781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4781 
Symbol 
ID3370331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5667885 
End bp5669849 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content63% 
IMG OID637655148 
Product4Fe-4S ferredoxin 
Protein accessionYP_237846 
Protein GI66048005 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.193508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTAG ACACTCTTCT TCCCATCCTG CTGTTCAGCG CCCTGGCCCT TGCGGCGCTG 
GGCGCCTGGC GGCGGGTAAC CCTGTGGCGC AACGGTCGGT CCTCGAAAGT CGATTGGCTG
GGTGGCCTGC TGGCTATGCC CAAGCGTTAC ATGGTCGATC TGCATCATGT GGTCGCACGC
GACAAATACA TCGCCAATAC CCACGTGGCC ACAGCGGGCG GTGCGGTGGC CTCGATTGTG
CTGGCGATTC TGGTGCACGG TTTCGGTCTG CATAATCGCG TGCTTGGCTA TGCGCTGCTG
CTGATGACGG CGGTGATGTT TGTCGGCGCG GTGTTTGTCT ATCGTCGTCG TCTGAACCCG
CCTGCGCGTC TGTCGAAAGG CCCATGGATG CGCCTGCCGA AAAGCCTCAT GGCGTTTTCC
GCGAGCTTCT TTCTGGTCAC GCTGCCGGTG GCCGGCATTC TTCCCGAGCA CTTCGGTGGC
TGGGTGCTGG TGGCCGTCCT TGGGCTGGGC GTGCTGTGGG GCGTGAGCGA ACTGTTTTTC
GGCATGACCT GGGGCGGGCC GATGAAGCAT GCCTTCGCCG GGGCGCTGCA CCTGGCCTGG
CATCGCCGGG CCGAGCGTTT TGGTGGCGGA CGTTCCACGG GCTTGAAACC GCTGGACCTG
GCCGATCGCA GCGCGCCGTT GGGTGTGGAA AAGCCCCAGG ACTTCACCTG GAATCAACTG
CTGGGCTTCG ACGCCTGCGT GCAGTGCGGC AAGTGCGAAG CGGCCTGCCC GGCGTTTGCG
GCGGGCCAGC CGCTCAACCC CAAAAAGCTG ATTCAGGACA TGGTGGTCGG CCTTGCCGGT
GGCACCGACG CAAAATTTGC GGGCAGTCCG TATCCATCGC TGGACGGTAA AGGCAAACCG
CTGGGCGAGC ATGGCGGCAA TCCGCATCAG CCCATCGTCA ACGGGCTGGT GGACGCCGAA
ACGCTGTGGT CCTGCACCAC ATGCCGGGCC TGCGTCGAAG AGTGTCCGAT GATGATCGAG
CACGTCGACG CCATCGTCGA CATGCGCCGC CACCTGACTC TCGAAAAGGG CGCTACGCCG
AACAAGGGCG CTGAAGTGCT GGACAACCTG ATTGCTACCG ACAACCCCGG CGGGTTTGCG
CCGGGCGGGC GAATGAACTG GGCGGCCGAT CTGAACCTGA CGCTGCTCAG CGAGAAAAAA
ACCGTGGATG TGCTGTTCTG GGTCGGTGAC GGCGCGTTCG ATATGCGTAA CCAGCGTACC
CTGCGCGCGT TCGTCAAAGT CCTCAAGGCG GCCGGTGTGG ATTTTGCCGT GCTGGGCCTC
GAAGAACGCG ACAGCGGCGA CGTGGCGCGA CGTTTGGGTG ATGAAGCGAC CTTCCAGACG
CTCGCCCGGC GCAACATTCA GACCCTGTCC CGGTACAGTG TCCAACGCAT CGTGACCTGC
GACCCGCACA GCTTTCATGT ACTGAAAAAC GAATATGGCG CTTTTGGCGG TGACTATCAG
GTGCAGCATC ACAGCACCTT CATGGCCGAG CTGGTGCGCA GCGGCGCCCT GAATCTGAGT
CAGCACAAAG GCGCCAGCGT GACCTATCAC GACCCGTGTT ATCTGGGCCG TTACAACGGC
GAATACGAGG CGCCGCGTGA AGTGCTGCGC GCACTGGGGA TCGAGATCAG GGAAATGCAG
CGCTCGGGCT TCCGTTCCCG CTGCTGCGGT GGCGGCGGTG GCGCGCCGAT CACGGATATT
CCCGGCAGAC AGCGGATTCC CGACATGCGC ATGGACGACA TTCGTGAAAC GGCTGCCGAG
CTGGTGGCCG TGGGTTGTCC ACAGTGCACG GCCATGCTCG AAGGCGTTGT CGAACCGCGA
CCGCTGATCA AGGACATCGC CGAGCTGGTG GCCGATGCGT TGATCGAGGA AGTTATCCCC
AGCACGCCAG CGCCGGCCAA ACGTGAACCT GCGGAGGTGC ACTGA
 
Protein sequence
MMLDTLLPIL LFSALALAAL GAWRRVTLWR NGRSSKVDWL GGLLAMPKRY MVDLHHVVAR 
DKYIANTHVA TAGGAVASIV LAILVHGFGL HNRVLGYALL LMTAVMFVGA VFVYRRRLNP
PARLSKGPWM RLPKSLMAFS ASFFLVTLPV AGILPEHFGG WVLVAVLGLG VLWGVSELFF
GMTWGGPMKH AFAGALHLAW HRRAERFGGG RSTGLKPLDL ADRSAPLGVE KPQDFTWNQL
LGFDACVQCG KCEAACPAFA AGQPLNPKKL IQDMVVGLAG GTDAKFAGSP YPSLDGKGKP
LGEHGGNPHQ PIVNGLVDAE TLWSCTTCRA CVEECPMMIE HVDAIVDMRR HLTLEKGATP
NKGAEVLDNL IATDNPGGFA PGGRMNWAAD LNLTLLSEKK TVDVLFWVGD GAFDMRNQRT
LRAFVKVLKA AGVDFAVLGL EERDSGDVAR RLGDEATFQT LARRNIQTLS RYSVQRIVTC
DPHSFHVLKN EYGAFGGDYQ VQHHSTFMAE LVRSGALNLS QHKGASVTYH DPCYLGRYNG
EYEAPREVLR ALGIEIREMQ RSGFRSRCCG GGGGAPITDI PGRQRIPDMR MDDIRETAAE
LVAVGCPQCT AMLEGVVEPR PLIKDIAELV ADALIEEVIP STPAPAKREP AEVH