| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4769 |
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| Symbol | |
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| ID | 3370319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5645169 |
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| End bp | 5646581 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637655136 |
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| Product | major facilitator transporter |
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| Protein accession | YP_237834 |
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| Protein GI | 66047993 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0499845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACT CAGCAGCGCC GATCATGGAC GAAAAGACCC TGCGCTGGAT GCCCTGGGTC
ATCGCCATCG CATTCTTCAT GCAAAGCCTG GACGGCACGA TTCTCAACAC CGCCTTGCCG
TCCATGGCCC GCTCACTGGC AGAAGACCCG TTGCGCATGC AGTCGGTGGT CATCGCCTAC
ATGCTGACCA TTGCGCTGCT GATCCCGGCC TCGGGCTGGA TCGCCGACCG GTTCGGGATC
AAGCGCATCT TCTTCAGCGC CATCCTGCTG TTCAGCTTCG GATCATTGCT GTGCGCGCTG
TCCTGGTCAC TGAACGTGCT GGTGGCCGCC CGGGTGATTC AGGGGCTGGG GGGCGCGCTG
ATGCTGCCCA TCGGGCGCCT GATCGTATTG CGCGCCTATC CGCGCTCGGA GCTGGTGCGA
ATCATGGGTT TTATCACCGT GCCGGGCCTT TTGGGCCCAT TGCTGGGCCC GACGCTTGGC
GGCTGGATGG TGGAGTACCT GAGCTGGCAC TGGATTTTCC TGATCAACAT TCCGGTCGGC
ATCCTCGGTT GCTATGCCGT CAAACACTTC ATCCCTGATC TTCCGGGAGG CGGTCGAACC
CGGTTTGACG GCGTCGGCTT CATCCTGTTT GGCGCGGCGA TGATACTGAT CACCATTGCC
CTGGAGGGCC TGGGCGAGCT GCACCTGCCA CACATGCGCG TGGTACTGCT GCTGTTTGCC
GGAATGGGCT GTCTGGCAGC GTATTGGCTG CGTGCCGGGC ACATCGAATC GCCGTTGTTT
GCCCCTTCAT TGTTCCGTAC CCGGACGTTT GCCGTCGGTA TCATGGGCAA CCTGTTCGCC
CGCCTGGGCA GCGGCGCGCT GCCCTTCCTG GTGCCATTGC TGCTGCAAGT GGCCCTGGGG
TATTCGCCGT CTCAGGCGGG TATGAGCATG TTGCCGCTGG CCGCCGCTGG CATGTTCGCC
AAGACTGTCG CCCGCTGGCT GATCGAGCGG CTGGGCTATC GCGTGATTCT GACCGGCAAC
ACACTGCTGC TGGGCATCCT GCTGGCCAGC CTGGCGCTGG TCGATGTGCA AACCCCATAC
TGGGTGTTGC TGGTGCATCT GGGGCTGCTC GGCGCGGTCA ACTCCTTGCA GTTCACGGCG
ATGAATACGG TCACCCTGAT CGATCTGGAC GATGCCAGTG CAGCGAGTGG CAACAGCCTG
CTCTCGGTCG TGGCACAGCT GTCCCTGAGT CTTGGCGTGG CAAGCGCAGC AGCCTTGCTG
GGTGGTTTCA GCGAAGAAGT AGCCACCGGC GAGGTCAGCA GCATGCTGGG GGCGTTCCAG
ATGACCTTCC TGAGTGTCGG GGTGCTGGCC ATGTTTGCAG CAGGTATTTT CCTGCAATTG
CCCGCGAAGG AGCCCAGGAT GGCCAAAGCC TGA
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| Protein sequence | MQNSAAPIMD EKTLRWMPWV IAIAFFMQSL DGTILNTALP SMARSLAEDP LRMQSVVIAY
MLTIALLIPA SGWIADRFGI KRIFFSAILL FSFGSLLCAL SWSLNVLVAA RVIQGLGGAL
MLPIGRLIVL RAYPRSELVR IMGFITVPGL LGPLLGPTLG GWMVEYLSWH WIFLINIPVG
ILGCYAVKHF IPDLPGGGRT RFDGVGFILF GAAMILITIA LEGLGELHLP HMRVVLLLFA
GMGCLAAYWL RAGHIESPLF APSLFRTRTF AVGIMGNLFA RLGSGALPFL VPLLLQVALG
YSPSQAGMSM LPLAAAGMFA KTVARWLIER LGYRVILTGN TLLLGILLAS LALVDVQTPY
WVLLVHLGLL GAVNSLQFTA MNTVTLIDLD DASAASGNSL LSVVAQLSLS LGVASAAALL
GGFSEEVATG EVSSMLGAFQ MTFLSVGVLA MFAAGIFLQL PAKEPRMAKA
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