Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4768 |
Symbol | |
ID | 3370318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5643834 |
End bp | 5645159 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637655135 |
Product | hypothetical protein |
Protein accession | YP_237833 |
Protein GI | 66047992 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.280128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCACC AACAGCAGTT CGAGGCGCTG GTCGCCGTGC TCAAGGCTGC CATCAGCCCG ACGGAACACT TCACCCTGGC CTACGACGCC GAGGCGTCTG ACTTCATCCG GTTCAACCAC GGCCAGGTTC GACAGGCCGG GAGCGTCCAG CAGGTCATCG CCACGTTCAA ACTGATCGAT GACGGCCGGC ATGCCAATCT GGAACTGACC TTGTCCGGCG ACGCCGAGAC CGACCAGCAG CGCCTTGTCG ACGCCCTGCA ACAATTGCGC GAAACACTGC CGTCGCTGGC CAGGGATCCC TATCTGTTGC CGAACACGAC TGCCTGGCAA AGCAGCAACG TTCAAGACTT GCCGCTGCCG GACAGCGCCC GGGTTGTCGA GCAGATCAGC GAACTGGCAG GCGATCTGGA CCTGGTAGGC TTTTATGCGG CAGGCCCGCT TTACCGCGGC TTCGCCAGTT CCTGGGGCGC GCTGGGCTGG CATCAGGCCA ACAGCTTCAA TTTCGACTGG AGCCTGTTTC ACGAAAACGG CCAGGCCGTG AAAGCCAACT ACGCCGGTCA CCACTGGAGC GACGAAGCCT TCGTGCAGCG TTTTCAGCAG GCCCGCGAAC AGCTGGAATT TCTCGGCCGC CCGCTGCATG CGCTCAAGCC CGGACAATAC CGCGCGTACC TGGCGCCAGC GGCTCTGGAC GAAGTCATCG GCATGCTCAC CTGGGGCGGA TTTTCCGCGC AGTCACTGGC CAGTAAACGC AGCCCGTTGC AAAGGCTGTA TGACGGCGAG ACGCCTTTCA GCCCGTTGGT CAACTTCGAC GAAAAAGTCA GCGGTTCACT CTCGCCGGCG TTTTCACGCG AAGGGTACCC GCGCAAGGAC CTGAAACTGA TCGTCGACGG GCAAGCCCGC GATCGACTGG TGGATTCGAG CAGCGCAGCC GAATACGGCC TGCCTGCCAA CGGCGCGGAT TACGGCGAAG GCCCAAGCGC GCTGAGTATT GCCGGCGGTT CGCTGGAGCT GGATCAGATC CTCGCCAGGC TGGGCACCGG GCTTTACATC AGTAACCTCT GGTACCTGAA CTTCTCCGAC CGCGCCGCTG CGCGCCTCAC CGGAATGACA CGTTTCGCAA CGTTCTGGGT CGAAGAGGGC AAGATCGTCG CGCCGGTGAG CACCATGCGC TTCGATGACA GCGCCTACAG CCTGCTGGGC AGCGCACTGG AGGACCTGAC CAAAGAGAGG GAACTGATTC TCCAATCGAG TACCTACAGT CAGCGCCAGA CCGGTTCAAT ACAGTTGCCT GGCGCATTGA TCAGCCGACT CACCCTCACG CTATAG
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Protein sequence | MSHQQQFEAL VAVLKAAISP TEHFTLAYDA EASDFIRFNH GQVRQAGSVQ QVIATFKLID DGRHANLELT LSGDAETDQQ RLVDALQQLR ETLPSLARDP YLLPNTTAWQ SSNVQDLPLP DSARVVEQIS ELAGDLDLVG FYAAGPLYRG FASSWGALGW HQANSFNFDW SLFHENGQAV KANYAGHHWS DEAFVQRFQQ AREQLEFLGR PLHALKPGQY RAYLAPAALD EVIGMLTWGG FSAQSLASKR SPLQRLYDGE TPFSPLVNFD EKVSGSLSPA FSREGYPRKD LKLIVDGQAR DRLVDSSSAA EYGLPANGAD YGEGPSALSI AGGSLELDQI LARLGTGLYI SNLWYLNFSD RAAARLTGMT RFATFWVEEG KIVAPVSTMR FDDSAYSLLG SALEDLTKER ELILQSSTYS QRQTGSIQLP GALISRLTLT L
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