Gene Psyr_4768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4768 
Symbol 
ID3370318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5643834 
End bp5645159 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content62% 
IMG OID637655135 
Producthypothetical protein 
Protein accessionYP_237833 
Protein GI66047992 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.280128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACC AACAGCAGTT CGAGGCGCTG GTCGCCGTGC TCAAGGCTGC CATCAGCCCG 
ACGGAACACT TCACCCTGGC CTACGACGCC GAGGCGTCTG ACTTCATCCG GTTCAACCAC
GGCCAGGTTC GACAGGCCGG GAGCGTCCAG CAGGTCATCG CCACGTTCAA ACTGATCGAT
GACGGCCGGC ATGCCAATCT GGAACTGACC TTGTCCGGCG ACGCCGAGAC CGACCAGCAG
CGCCTTGTCG ACGCCCTGCA ACAATTGCGC GAAACACTGC CGTCGCTGGC CAGGGATCCC
TATCTGTTGC CGAACACGAC TGCCTGGCAA AGCAGCAACG TTCAAGACTT GCCGCTGCCG
GACAGCGCCC GGGTTGTCGA GCAGATCAGC GAACTGGCAG GCGATCTGGA CCTGGTAGGC
TTTTATGCGG CAGGCCCGCT TTACCGCGGC TTCGCCAGTT CCTGGGGCGC GCTGGGCTGG
CATCAGGCCA ACAGCTTCAA TTTCGACTGG AGCCTGTTTC ACGAAAACGG CCAGGCCGTG
AAAGCCAACT ACGCCGGTCA CCACTGGAGC GACGAAGCCT TCGTGCAGCG TTTTCAGCAG
GCCCGCGAAC AGCTGGAATT TCTCGGCCGC CCGCTGCATG CGCTCAAGCC CGGACAATAC
CGCGCGTACC TGGCGCCAGC GGCTCTGGAC GAAGTCATCG GCATGCTCAC CTGGGGCGGA
TTTTCCGCGC AGTCACTGGC CAGTAAACGC AGCCCGTTGC AAAGGCTGTA TGACGGCGAG
ACGCCTTTCA GCCCGTTGGT CAACTTCGAC GAAAAAGTCA GCGGTTCACT CTCGCCGGCG
TTTTCACGCG AAGGGTACCC GCGCAAGGAC CTGAAACTGA TCGTCGACGG GCAAGCCCGC
GATCGACTGG TGGATTCGAG CAGCGCAGCC GAATACGGCC TGCCTGCCAA CGGCGCGGAT
TACGGCGAAG GCCCAAGCGC GCTGAGTATT GCCGGCGGTT CGCTGGAGCT GGATCAGATC
CTCGCCAGGC TGGGCACCGG GCTTTACATC AGTAACCTCT GGTACCTGAA CTTCTCCGAC
CGCGCCGCTG CGCGCCTCAC CGGAATGACA CGTTTCGCAA CGTTCTGGGT CGAAGAGGGC
AAGATCGTCG CGCCGGTGAG CACCATGCGC TTCGATGACA GCGCCTACAG CCTGCTGGGC
AGCGCACTGG AGGACCTGAC CAAAGAGAGG GAACTGATTC TCCAATCGAG TACCTACAGT
CAGCGCCAGA CCGGTTCAAT ACAGTTGCCT GGCGCATTGA TCAGCCGACT CACCCTCACG
CTATAG
 
Protein sequence
MSHQQQFEAL VAVLKAAISP TEHFTLAYDA EASDFIRFNH GQVRQAGSVQ QVIATFKLID 
DGRHANLELT LSGDAETDQQ RLVDALQQLR ETLPSLARDP YLLPNTTAWQ SSNVQDLPLP
DSARVVEQIS ELAGDLDLVG FYAAGPLYRG FASSWGALGW HQANSFNFDW SLFHENGQAV
KANYAGHHWS DEAFVQRFQQ AREQLEFLGR PLHALKPGQY RAYLAPAALD EVIGMLTWGG
FSAQSLASKR SPLQRLYDGE TPFSPLVNFD EKVSGSLSPA FSREGYPRKD LKLIVDGQAR
DRLVDSSSAA EYGLPANGAD YGEGPSALSI AGGSLELDQI LARLGTGLYI SNLWYLNFSD
RAAARLTGMT RFATFWVEEG KIVAPVSTMR FDDSAYSLLG SALEDLTKER ELILQSSTYS
QRQTGSIQLP GALISRLTLT L