Gene Psyr_4757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4757 
Symbol 
ID3370307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5633856 
End bp5634518 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content56% 
IMG OID637655124 
Productregulatory protein, TetR 
Protein accessionYP_237822 
Protein GI66047981 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0842681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCGC GTACCAAAAC CCGTGAACGA ATCGTGCAAA CCAGTCTGGA ACTGTTCAAT 
CAGCAGGGTG AGCGTAGTGT GACCACCAAT CACATCGCTG CGCATATGGA AATCTCGCCC
GGCAATCTCT ATTACCACTT CGCCAACAAG CAGGCGATCA TCGCCGAACT GTTCTCCGAG
TACGAGGTGC TGATCGGCAG TTTCCTGACC TTGCCAGCCG ATCGTGCGCC GACCATCGAG
GACAAGCGCG ATTACTTCCT GGCGATCATC GACGCCATGT GGCGCTACCG TTTTCTGCAC
CGTGACCTTG AGCACCTGCT GACGTCCGAT GAGGAGCTGG CGCGGCGCTA TCGGCGTTTC
TCATACCGCT GTCTGATGCA GGCGATGACC ATCTATCGGG GATTCATCAA GGCAGGCATC
CTGAAGATGG ATGAGTCGCA GATCGAGTGG ACCAGTCTCA ACACCTGGAT CGTCCTCACG
TCGTGGGTGC GTTTTCTGTG CACCAACCGG GAAAACTCCA CGCAGATCAA CCAGTCGGCT
ATTCGACGTG GCGTCTATCA GGTACTTATG CTCGAATCTG TTTTTGTCGC GCCTCAGGCT
CGCGAAGCGT TCGATGCACT GTGCGAAACG TTTCACGCGT CGCTGCCCGA GGTTCTGATG
TGA
 
Protein sequence
MAPRTKTRER IVQTSLELFN QQGERSVTTN HIAAHMEISP GNLYYHFANK QAIIAELFSE 
YEVLIGSFLT LPADRAPTIE DKRDYFLAII DAMWRYRFLH RDLEHLLTSD EELARRYRRF
SYRCLMQAMT IYRGFIKAGI LKMDESQIEW TSLNTWIVLT SWVRFLCTNR ENSTQINQSA
IRRGVYQVLM LESVFVAPQA REAFDALCET FHASLPEVLM