Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4757 |
Symbol | |
ID | 3370307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5633856 |
End bp | 5634518 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637655124 |
Product | regulatory protein, TetR |
Protein accession | YP_237822 |
Protein GI | 66047981 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0842681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCGC GTACCAAAAC CCGTGAACGA ATCGTGCAAA CCAGTCTGGA ACTGTTCAAT CAGCAGGGTG AGCGTAGTGT GACCACCAAT CACATCGCTG CGCATATGGA AATCTCGCCC GGCAATCTCT ATTACCACTT CGCCAACAAG CAGGCGATCA TCGCCGAACT GTTCTCCGAG TACGAGGTGC TGATCGGCAG TTTCCTGACC TTGCCAGCCG ATCGTGCGCC GACCATCGAG GACAAGCGCG ATTACTTCCT GGCGATCATC GACGCCATGT GGCGCTACCG TTTTCTGCAC CGTGACCTTG AGCACCTGCT GACGTCCGAT GAGGAGCTGG CGCGGCGCTA TCGGCGTTTC TCATACCGCT GTCTGATGCA GGCGATGACC ATCTATCGGG GATTCATCAA GGCAGGCATC CTGAAGATGG ATGAGTCGCA GATCGAGTGG ACCAGTCTCA ACACCTGGAT CGTCCTCACG TCGTGGGTGC GTTTTCTGTG CACCAACCGG GAAAACTCCA CGCAGATCAA CCAGTCGGCT ATTCGACGTG GCGTCTATCA GGTACTTATG CTCGAATCTG TTTTTGTCGC GCCTCAGGCT CGCGAAGCGT TCGATGCACT GTGCGAAACG TTTCACGCGT CGCTGCCCGA GGTTCTGATG TGA
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Protein sequence | MAPRTKTRER IVQTSLELFN QQGERSVTTN HIAAHMEISP GNLYYHFANK QAIIAELFSE YEVLIGSFLT LPADRAPTIE DKRDYFLAII DAMWRYRFLH RDLEHLLTSD EELARRYRRF SYRCLMQAMT IYRGFIKAGI LKMDESQIEW TSLNTWIVLT SWVRFLCTNR ENSTQINQSA IRRGVYQVLM LESVFVAPQA REAFDALCET FHASLPEVLM
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