| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4748 |
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| Symbol | |
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| ID | 3370298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5623763 |
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| End bp | 5624617 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637655115 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_237813 |
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| Protein GI | 66047972 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.294089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0445386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTT CTTTGCAACC TGCTTATGCT TTAGTCCCGG GTGCAAACCT CGAGGCCTAT
GTGCAAACGG TCAACAGCAT TCCATTGCTG ACGCCCGAGC GGGAGCGTGA ACTGGCTGAG
AGTCTCTACT ATGAGCAGGA TCTGGACGCG GCCCGACAAA TGGTCCTCGC CCACCTGCGC
TTTGTCGTGC ACATCGCTCG CAGTTATTCG GGTTACGGTC TGGCTCAGGC TGACCTGATC
CAGGAAGGTA ATGTCGGTCT GATGAAGGCC GTGAAGCGTT TCAACCCGGA AATGGGCGTG
CGTCTGGTGT CTTTTGCCGT GCACTGGATC AAGGCCGAAA TTCACGAGTT CATCCTGCGC
AACTGGCGCA TCGTCAAGGT CGCCACGACC AAGGCACAGC GCAAATTGTT CTTCAACCTG
CGCAGCCAGA AGAAGCGTCT GGCCTGGCTG AACAACGATG AAGTGCATCG CGTAGCGGAA
AGCCTGGGCG TCGAACCGCG TGAAGTGCGG GAGATGGAAA GCCGTCTGAC CGGCCATGAC
ATGGCCTTTG ACCCGGCCGC CGAAGCGGAT GACGACAGCG CGTTCCAGTC GCCGGCCAAT
TATCTGGAAG ACCACCGCTA CGACCCGGCG CGTCAACTGG AAGATTCCGA CTGGACCGAC
AACTCCACCG CCAATCTGCA TCAGGCGCTG GACGTGCTGG ACGAACGCAG CCGCGACATT
CTCTACCAGC GCTGGCTGGC AGAAGAAAAA GCCACGCTGC ACGACCTGGC GCAGAAGTAC
AACGTCTCCG CCGAGCGTAT TCGTCAGCTG GAAAAAAGCG CGATGAACAA GCTCAAGACG
TCGATCGCCG CGTAA
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| Protein sequence | MTTSLQPAYA LVPGANLEAY VQTVNSIPLL TPERERELAE SLYYEQDLDA ARQMVLAHLR
FVVHIARSYS GYGLAQADLI QEGNVGLMKA VKRFNPEMGV RLVSFAVHWI KAEIHEFILR
NWRIVKVATT KAQRKLFFNL RSQKKRLAWL NNDEVHRVAE SLGVEPREVR EMESRLTGHD
MAFDPAAEAD DDSAFQSPAN YLEDHRYDPA RQLEDSDWTD NSTANLHQAL DVLDERSRDI
LYQRWLAEEK ATLHDLAQKY NVSAERIRQL EKSAMNKLKT SIAA
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