Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4729 |
Symbol | |
ID | 3370279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5606522 |
End bp | 5607655 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637655096 |
Product | PepSY-associated TM helix |
Protein accession | YP_237794 |
Protein GI | 66047953 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCC AAACCGTGCG CCGCTGGTCC ATCGTGCATA CCTGGAGCAG CCTGATTTGC ACCCTGTTCC TGTTGATGCT GGCTGTCACC GGCCTGCCGC TGATCTTTCA TCATGAAATC GATCATCTGC TCGGCGACGC TCCGCATTAC AAAGAGATGC CTGCCGATAC GCCACGCCTG GACCTGGAGC AACTGGCCAG GGCTGCCGAA GCGCATCGCC CCGGCGAGGT GATGCAGTAT TTTGGCTGGG ACGATGAAGA CCCCAATGGC GTCATGGCAA TCACCGCTGC AACCGCCGGC ACCGAGCCCA ACTCCTCGCA CACCTTCGCC CTCGATGCGC GCACCGGTGA GGCACTGGAG ATGCCTTCTG CCAACGGCGG CTTCATGATG GTCATGCTGC GCCTGCACGT AGACATGTAC GCCAATCTGC CCGGCAAACT GTTGCTGGCG TTCATGGGCT TGCTGTTCGT GGTGGCGATC GTTTCCGGGA CCGTGCTGTA TGCGCCGTTC ATGCGCAAGC TGGAGTTCGG TCAGGTGCGG GTCAATAAAT CCAGGCGTAC GCGCTGGCTG GACCTGCACA ACCTGATTGG CGTAGTGACA TTGACCTGGG CGCTGGTGGT CGGCGTGACC GGGGTGATCA GCGCCTGCGC CGATCTGCTG ATTGCCTCCT GGCGCAACGA TGCGCTGGCC ACCATGATCG CCCCTTACAA GGACGCGCCG CCATTGACCC AGCGCGCCCC GGCGACTCGA TTGCTGGAAA TTGCCGAATC CGCTGCGCCC GGCATGCAGG CCGATTTCAT CGCCTTCCCC GGCACGCGCT TCTCCAGCGA GCATCATTAC GCGGTGTTCC TCAAAGGCAA TACACACCTG ACTGCGCACC TCGCCACACC GGTGCTGATC GACGCCCAGA CCCTGCACGT CACCGCGGTG GTCGAACGTC CCTGGTACAT GGACGCACTG GGGATGTCGC AACCGCTGCA TTTCGGCGAT TACGGCGGCA TGCCGATGAA GATCCTCTGG GCGGTGCTGG ACGTGCTGAC CATCATCGTA CTCGGCAGCG GCGTTTATCT GTGGTGGGTG AGGCGTCGTG CCGCGCGCTC GGTGAGCGCT GTTCAGGCTC AGGTGGCGCA ATGA
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Protein sequence | MKSQTVRRWS IVHTWSSLIC TLFLLMLAVT GLPLIFHHEI DHLLGDAPHY KEMPADTPRL DLEQLARAAE AHRPGEVMQY FGWDDEDPNG VMAITAATAG TEPNSSHTFA LDARTGEALE MPSANGGFMM VMLRLHVDMY ANLPGKLLLA FMGLLFVVAI VSGTVLYAPF MRKLEFGQVR VNKSRRTRWL DLHNLIGVVT LTWALVVGVT GVISACADLL IASWRNDALA TMIAPYKDAP PLTQRAPATR LLEIAESAAP GMQADFIAFP GTRFSSEHHY AVFLKGNTHL TAHLATPVLI DAQTLHVTAV VERPWYMDAL GMSQPLHFGD YGGMPMKILW AVLDVLTIIV LGSGVYLWWV RRRAARSVSA VQAQVAQ
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