Gene Psyr_4717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4717 
Symbol 
ID3370267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5590242 
End bp5591099 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content58% 
IMG OID637655084 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_237782 
Protein GI66047941 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCG CGCCCGACAC ATGGATTTTG ACCGCCGACT GCCCCAGCAT GCTGGGCACG 
GTAGACGCAG TGACGCGCTT TCTGTTCGAG CAGGGTTGCT ACGTCACAGA ACACCACTCC
TTCGATGACC GCCTCTCGGG ACGCTTCTTC ATCCGTGTGG AGTTTCGTCA GCCCGAGGCT
TTCGACGAAC AGGCGTTCAG GGCCGGGCTG AGTGAGCGCG GCGAAACGTT TGGCATGATC
TTCGAACTCA CCGCACCCAA CTACCGGCCA AAAGTAGTGA TCATGGTCTC GAAAGCCGAT
CATTGTCTCA ATGACCTGCT CTATCGCCAG CGTATCAATC AACTGTCCAT GGACGTGGTC
GCGGTGGTGT CCAATCACCC TGATCTTGAG CCACTGGCTG GCTGGCACGG CATTACGTAC
TACCATTTCC CACTGGACCC GAACGACAAG CCTGCGCAGG AAGCCAAAGT CTGGCAGGTC
ATCGAAGAGT CTGGTGCAGA ACTGGTTATT CTTGCCCGTT ACATGCAGGT CCTGTCGCCG
GACCTGTGTC GCAAGCTGGA CGGCAAGGCG ATCAATATCC ACCACTCGTT GCTGCCCGGT
TTCAAGGGCG CCAAGCCCTA CCATCAGGCG TACAACAAGG GGGTGAAGCT GGTCGGTGCC
ACGGCGCATT ACATCAACAA CGATCTGGAC GAAGGTCCGA TCATTGCCCA GGGCGTGGAA
GTGGTCGATC ACAGTCACTA TCCCGAAGAC CTGATCGCCA AGGGTCGAGA CATCGAAGGG
CTGACACTGG CCCGCGCGGT GGGTTATCAC ATCGAACGGC GGGTGTTCCT CAACGCCAAC
AGGACAGTGG TTTTGTAG
 
Protein sequence
MSRAPDTWIL TADCPSMLGT VDAVTRFLFE QGCYVTEHHS FDDRLSGRFF IRVEFRQPEA 
FDEQAFRAGL SERGETFGMI FELTAPNYRP KVVIMVSKAD HCLNDLLYRQ RINQLSMDVV
AVVSNHPDLE PLAGWHGITY YHFPLDPNDK PAQEAKVWQV IEESGAELVI LARYMQVLSP
DLCRKLDGKA INIHHSLLPG FKGAKPYHQA YNKGVKLVGA TAHYINNDLD EGPIIAQGVE
VVDHSHYPED LIAKGRDIEG LTLARAVGYH IERRVFLNAN RTVVL