| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4715 |
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| Symbol | |
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| ID | 3370265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5586261 |
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| End bp | 5589281 |
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| Gene Length | 3021 bp |
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| Protein Length | 1006 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637655082 |
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| Product | sarcosine oxidase, alpha subunit, heterotetrameric |
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| Protein accession | YP_237780 |
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| Protein GI | 66047939 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.764897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA CCCATCGCCT GCCCAACGGC GGCCGTATCA ATCGCAGCAA GGTGCTCAAC
TTTACCTTCA ACGGCCAGAC CTACCAGGGC TTTGAAGGTG ACTCGCTGGC CTCTGCCCTG
CTCGCCAACG GTGTCGATAT CATCGGCCGC AGCTTCAAAT ACTCCCGCCC GCGCGGCATC
TTCGCAGCGG GTTCGGAAGA GCCCAATGCG GTGCTGCAGA TCGGCGCGAC CGAAGCGACG
CAGATCCCCA ACGTGCGCGC TACGCAACAG GCGCTGTACT CGGGACTGGT CGCAACCAGC
ACCAACGGCT GGCCAAGCGT GAACACCGAC GTGATGGGCA TTCTGGGCAA GGTCGGCGGC
AAGCTGATGC CGCCGGGTTT CTACTACAAA ACCTTCATGT ACCCGCAATC GTTCTGGATG
ACTTACGAGA AGTACATCCG CAAGGCTGCC GGCCTGGGGC GCTCGCCGAC CGAGAACGAC
CCGGACAGCT ACGATGCGAT GAACCAGCAC TGCGACGTGT TGATCGTCGG TGCGGGCCCG
GCCGGTCTGG CCGCTGCCTT GGCAGCAGGT CGCAGCGGTG CCCGAGTGAT CATTGCCGAT
GAACAGGAAG AGTTCGGCGG CAGCCTGCTC GACAGCCGCG AAAGCCTCGA CGGCAAACCC
GCCACTGAAT GGGTGTCGAC GGTCGTCGCC GAGCTGAAAA GCCTGCACAA CGTCACCCTG
CTGCCGCGTT CCACGGTCAA TGGTTACCAC GATCATAATT TCCTGACCAT CCACGAGCGC
CTGACCGACC ACCTGGGCGA TCGCGCGCCG ATCGGCATGG TCCGCCAGCG CATGCACCGG
GTACGCGCCA AACGCGTAGT GCTGGCCGCC GGTACTCACG AGCGTCCGCT GGTCTATGGC
AACAACGATG TGCCCGGCAA CATGCTGGCC GGTGCCGTAT CGACTTACGT CCGTCGTTAT
GGCGTGGCAC CAGGCAAGAA ACTGGTGCTT TCCACCAACA ACGATCACGC CTATCGCGTC
GCTCTGGACT GGCTCGACGC CAGTCTGCAC GTGGTCGCGA TTGCCGATGC ACGGCATAAC
CCACGTGGTC CGCTGGTTGA AGAAGCGCGG GCCAAAGGCA TTCGCATCCT GACCGGCAGC
GCGGTCATCG AGGCCCGCGG CAGCAAGCGC GTGACGGCTG CCCGCGTTGC CGCCATCGAC
GTCAAGACGC ACAGCGTGAC CAGCCCCGGC GAATGGCTTG AATGCGACGT GGTTGCCAGC
TCCGGCGGTT ACAGCCCGAT CGTGCACCTG GCCTCGCACC TGGGCGGCAA GCCGGTCTGG
CGCGAGGACA TCCTCGGCTT CGTACCAGGC GAGGCACCAC AGAAACGTAT CTGCGTAGGC
GGCGTCAACG GCGTCTACAG CCTGGCTGAC AGTCTTGCCG ATGGCTTCGA AGGCGGCGTG
CGCGCTGCCA GTGAAGCGGG CTTCAAGGTG GTCGAAGGCG TGATGCCCAA AGCCCTCAGC
CGTGCTGAAG AGCCGACGCT GGCGCTGTTT CAGGTGCCGC ATGAAAAAGG CACCGCTCGG
GCACCCAAGC AGTTCGTTGA CTTTCAGAAC GACGTCACCG CCGCCGCCAT TGAACTGGCA
ACGCGCGAGG GTTTCGAGTC GGTCGAGCAC GTCAAGCGCT ACACCGCTCT GGGTTTCGGC
ACCGATCAGG GCAAGCTGGG CAACGTCAAC GGCCTGGCCA TCGCCGCCCG TTCACTGAAT
GTGTCGATCC CGGAAATGGG CACCACCATG TTCCGTCCCA ACTACACGCC GGTGACCTTC
GGCGCGATAG CCGGACGTCA TTGCAAACAC ATCTTCGAAC CCGTGCGGTT CACCGCGCTG
CATGCCTGGC ATGTCAAAAA CGGTGCTGAA TTCGAGGACG TCGGCCAGTG GAAACGGCCG
TGGTACTTCC CGAAAAACGG CGAAGACCTG CCCGCCGCCG TTGCTCGCGA ATGCAAGGCG
GTGCGCGACA GCGTCGGCCT GCTGGACGCA TCGACGCTGG GCAAGATCGA TATTCAAGGC
CCGGATGCAC GCGAGTTTCT CAACCGCATC TACACCAACG CCTGGACCAA ACTGGACGTG
GGCAAGGCCC GCTATGGCCT GATGTGCAAG GAAGACGGCA TGGTCTTCGA TGACGGGGTC
ACTGCCTGTC TCGCTGACAA CCACTTCCTG ATGACCACCA CCACAGGCGG CGCAGCGCGT
GTCCTGCAAT GGCTGGAAAT CTATCAACAG ACCGAATGGC CGGACCTGAA AGTGTATTTC
ACCTCAGTGA CCGATCACTG GGCGACCCTG ACGCTGTCCG GCCCCAACAG CCGCAAGCTG
CTCAGCGAAG TCACCGATAT CGATCTGGGC CGTGACGCCT TTCCGTTCAT GACCTGGAAG
GAAGGTCTGG TCGCCGGAGT GCCGGCCCGG GTATTCCGCA TCTCGTTTAC CGGCGAGCTG
TCCTACGAGG TCAACATTCA GGCCGACTAC GCGATGGGCG TTCTGGAAAA GATCGCCGAG
GCAGGCAAAC AGTACAACCT GACGCCTTAC GGCACCGAGA CCATGCACGT GCTGCGCGCA
GAGAAGGGTT TCATCATCGT CGGTCAGGAC ACTGACGGCT CGATGACGCC CGACGACCTG
AACATGGGCT GGTGTGTCGG CCGTACCAAG CCGTTCTCCT GGATCGGCTG GCGCGGCATG
AATCGCGAAG ACTGCGTGCG TGAACAGCGC AAGCAACTGG TCGGCCTCAA GCCGGTGGAC
CCTGCCAAAT GGCTGCCGGA AGGCGCGCAA CTGGTCTTCG ACACCAAACA GACGATTCCG
ATGAGCATGG TCGGCCACGT GACCTCCAGT TACGCGCACA ACTCGCTGGG CTATTCGTTC
GCGATGGGCG TGGTCAAAGG CGGCCTGGCG CGTATGGGCG AGCGGGTCTT CGCACCCTTG
GCCGATGGCA GCGTGATCGA AGCCGAGATC GTTTCTTCGG TGTTCTTCGA TCCGAAGGGC
GAGCGGCAGA ACATCGAGTA G
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| Protein sequence | MSQTHRLPNG GRINRSKVLN FTFNGQTYQG FEGDSLASAL LANGVDIIGR SFKYSRPRGI
FAAGSEEPNA VLQIGATEAT QIPNVRATQQ ALYSGLVATS TNGWPSVNTD VMGILGKVGG
KLMPPGFYYK TFMYPQSFWM TYEKYIRKAA GLGRSPTEND PDSYDAMNQH CDVLIVGAGP
AGLAAALAAG RSGARVIIAD EQEEFGGSLL DSRESLDGKP ATEWVSTVVA ELKSLHNVTL
LPRSTVNGYH DHNFLTIHER LTDHLGDRAP IGMVRQRMHR VRAKRVVLAA GTHERPLVYG
NNDVPGNMLA GAVSTYVRRY GVAPGKKLVL STNNDHAYRV ALDWLDASLH VVAIADARHN
PRGPLVEEAR AKGIRILTGS AVIEARGSKR VTAARVAAID VKTHSVTSPG EWLECDVVAS
SGGYSPIVHL ASHLGGKPVW REDILGFVPG EAPQKRICVG GVNGVYSLAD SLADGFEGGV
RAASEAGFKV VEGVMPKALS RAEEPTLALF QVPHEKGTAR APKQFVDFQN DVTAAAIELA
TREGFESVEH VKRYTALGFG TDQGKLGNVN GLAIAARSLN VSIPEMGTTM FRPNYTPVTF
GAIAGRHCKH IFEPVRFTAL HAWHVKNGAE FEDVGQWKRP WYFPKNGEDL PAAVARECKA
VRDSVGLLDA STLGKIDIQG PDAREFLNRI YTNAWTKLDV GKARYGLMCK EDGMVFDDGV
TACLADNHFL MTTTTGGAAR VLQWLEIYQQ TEWPDLKVYF TSVTDHWATL TLSGPNSRKL
LSEVTDIDLG RDAFPFMTWK EGLVAGVPAR VFRISFTGEL SYEVNIQADY AMGVLEKIAE
AGKQYNLTPY GTETMHVLRA EKGFIIVGQD TDGSMTPDDL NMGWCVGRTK PFSWIGWRGM
NREDCVREQR KQLVGLKPVD PAKWLPEGAQ LVFDTKQTIP MSMVGHVTSS YAHNSLGYSF
AMGVVKGGLA RMGERVFAPL ADGSVIEAEI VSSVFFDPKG ERQNIE
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