| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4713 |
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| Symbol | |
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| ID | 3370263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5584702 |
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| End bp | 5585952 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637655080 |
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| Product | sarcosine oxidase, beta subunit, heterotetrameric |
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| Protein accession | YP_237778 |
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| Protein GI | 66047937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATT ACTCAGGCTT CGGCCTTCTC AAGCATTCCC TCAGCCACCA TGAAAACTGG
CAGCGCATGT GGCGCACGCC GACCCCGAAA AAGGTCTACG ACGTGGTCAT CGTCGGCGGC
GGCGGGCACG GCCTGGCGAC GGCCTATTAT CTGGCCAAGG AGCACGGCAT CACCAACGTG
GCCGTGGTCG AGAAAGGCTG GCTGGGCGGT GGCAACACTG CGCGCAACAC CACCATCGTG
CGCTCCAACT ACCTGTGGGA CGAGTCGGCC CACCTGTATG AACACGCGAT GAAACTGTGG
GAAGGCCTGT CCCAGGAACT GAACTACAAC GTCATGTTCT CCCAGCGCGG CGTCTACAAC
CTGTGCCACA CCCTGCAGGA CATGCGCGAC TCCGAGCGCC GCGTCAGCGC CAACCGGCTT
AACGGCGTGG ACGGCGAATT GCTCAACGGC CAGCAGGTCG CCGAGGAAAT CCCGTACCTG
GACTGCTCGA AAAACACCCG TTACCCGATC ATCGGCGCAA CCGTTCAGCG CCGTGGTGGC
GTCGCCCGTC ACGACGCGGT GGCCTGGGGC TTCGCCCGTG CGGCCGATGC GCTGGGCGTT
GACCTGATTC AGCAGACCGA AGTCATCGGC TTTCGCAAGG AAAACGGCGT GTGCATCGGA
GTGGAAACCA ACAAGGGTTT CATCGGTGCC AAACGTGTCG GTGTGGTCAC CGCCGGCAAC
TCCGGGCACA TGGCCAGGCT GGCAGGCTTC CGTCTGCCCA TCGAATCACA TCCGTTGCAG
GCACTGGTTT CCGAGCCGAT CAAACCGATT ATCGACAGCG TCATCATGTC CAACGCGGTA
CACGGCTACA TCAGCCAGTC CGACAAGGGC GACCTGGTGA TCGGCGCCGG TATCGACAGT
TGGGTCGGCT ACGGCCAGCG CGGCTCGTAC CCGGTGATCG AACACACCAT CCAGGCCATC
GTCGAGATGT TCCCGGTGCT GTCCCGCGTG CGCATGAACC GTCAGTGGGG CGGCATCGTC
GACACCACGC CGGACGCCTG CCCGATCATT TCCAAGACCC CGGTGCCGAA CATGTTCTTC
AACTGCGGCT GGGGCACAGG CGGCTTCAAG GCCACGCCGG GCTCGGGTAA CGTGTTTGCC
GCCAGCCTGG CCAAAGGCGA GATGCATCCG CTGGCCAAAC CGTTCTCCAT TGACCGTTTC
CACAACGGCG CACTCATCGA CGAACACGGC GCTGCAGCCG TAGCCCACTA A
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| Protein sequence | MQHYSGFGLL KHSLSHHENW QRMWRTPTPK KVYDVVIVGG GGHGLATAYY LAKEHGITNV
AVVEKGWLGG GNTARNTTIV RSNYLWDESA HLYEHAMKLW EGLSQELNYN VMFSQRGVYN
LCHTLQDMRD SERRVSANRL NGVDGELLNG QQVAEEIPYL DCSKNTRYPI IGATVQRRGG
VARHDAVAWG FARAADALGV DLIQQTEVIG FRKENGVCIG VETNKGFIGA KRVGVVTAGN
SGHMARLAGF RLPIESHPLQ ALVSEPIKPI IDSVIMSNAV HGYISQSDKG DLVIGAGIDS
WVGYGQRGSY PVIEHTIQAI VEMFPVLSRV RMNRQWGGIV DTTPDACPII SKTPVPNMFF
NCGWGTGGFK ATPGSGNVFA ASLAKGEMHP LAKPFSIDRF HNGALIDEHG AAAVAH
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