Gene Psyr_4700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4700 
Symbol 
ID3370250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5569094 
End bp5571271 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content61% 
IMG OID637655067 
Productmalate synthase G 
Protein accessionYP_237765 
Protein GI66047924 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01345] malate synthase G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0658249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.952597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGT ACGTTCAAGT CGGTGACCTG CAAGTCGCCA GAGTCCTGTT CGACTTCGTG 
CAGAACGAAG CCACCCCCGG AACCGGCGTC GATGCCACTG CGTTCTGGGC CGGTGCGGAC
AAACTGATCC ACGACCTTGC GCCAAAGAAC AAGGCACTGC TCGCCAAACG TGATGAGTTA
CAGGCGAAAA TCGACGCCTG GCACCAGTCG CATGCCGGGC AGGCTCACGA CGCCTCGGCC
TACAAAGCCT TCCTTCAGGA GATCGGCTAC CTGCTGCCAG AAGCGGCGGA TTTCCAGATC
ACCACGCAAA ACGTCGATGA AGAAATCGCC ACCATGGCTG GCCCGCAACT GGTCGTGCCG
GTGATGAACG CCCGGTTTGC GCTCAATGCG TCGAATGCCC GTTGGGGTTC GCTGTATGAC
GCGCTCTACG GCACCGACGC CATCAGCGAA GAAGGCGGCG CGCAAAAGGG CAAGGGCTAT
AACAAGGTGC GTGGCGACAA GGTGATTGCT TTCGCTCGTG CCTTTCTCGA TCAGGCAGCG
CCTCTGTCAG CAGGTTCACA TGCCGACTCG ACAGCTTATA AGCTGATCGA CGGCAAGCTG
GTCGTCAGTC TCAAGGGTGG CAGCAATACC GGCCTGCACG ATGACGCCCA ACTGATCGGT
TTTCAAGGCG ATGCCCTGGC GCCGTTTGCC TTGCTGCTCA AGCACAACGG TCTGCACTTC
GAACTGCAGA TCGACGCCGC CAGCCCGGTC GGGCAGACCG ATCCGGCGGG CGTGAAAGAC
ATCCTCATGG AAGCCGCGCT GACCACCATC ATGGACTGCG AAGATTCCAT TGCCGCTGTG
GACGCCGACG ACAAAGTGGT CGTCTACCGC AACTGGCTGG GCCTGATGAA GGGCGACCTG
GCCGAGTCGG TGTCCAAGGG CGGTGAAACC TTTACCCGCA CCATGAACCC GGACCGCGTC
TACACCACGC CAGAGGGCGG CGAAGTCACC CTGCACGGTC GCTCGCTGCT GTTCATTCGC
AACGTGGGCC ACTTGATGAC CATCGATGCG ATACTCGACA AGCATGGCAA CGAAGTGCCA
GAAGGCATTC TCGACGGCCT GCTGACCAGT CTCGCCGCCC TCCACAACCT CAAGGGCAAC
ACCTCGCGCA GCAACAGCCG CAGCGGCTCG ATGTACATCG TCAAACCGAA GATGCACGGT
CCGCAGGAAG CTGCATTCAC CAACGAACTG TTCGAGCGTA TCGAGCAGGT ACTGGGCTTG
CCGCGTAACA CCTTGAAGGT CGGGATCATG GACGAGGAGC GCCGTACCAC GGTCAACCTC
AAGGCCTGCA TTCAGGCCGC CAGCGAGCGT GTGGTGTTCA TCAACACCGG CTTCCTCGAC
CGCACCGGCG ACGAAATCCA TACCTCCATG GAAGCGGGAC CGGTGGTACG CAAGGCACAG
ATGAAAGCCG AGAAGTGGAT CACTGCCTAC GAGAACTCCA ACGTCGACAT CGGTCTGAAA
TGCGGCCTGC AAGGTCGCGC ACAGATCGGC AAAGGCATGT GGGCCATGCC GGACCTGATG
GCCGCCATGC TGGAGCAGAA AATCGCTCAT CCACTGGCTG GCGCCAACAC CGCCTGGGTC
CCGTCACCTA CGGCGGCTGC GCTGCACGCG CTGCATTACC ACAAGGTCGA CGTGTTCGCC
CGGCAGGCCG AACTGGCGCA GCGCGAGCAA GCCTCGGTGG ATGACATTCT GACCATTGCG
CTGGCACCGA ACACGGACTG GACGCCGGAA GAAATCCAGA ACGAACTGGA CAACAACGCG
CAGGGCATTC TTGGCTACGT AGTGCGCTGG ATCGATCAGG GCGTGGGGTG TTCGAAAGTG
CCGGACATCA ATGACATCGG CCTGATGGAA GACCGCGCTA CGCTGCGCAT CTCCAGCCAG
CACATGGCCA ACTGGCTGCG TCATGGTGTC GTCAGCGAAA CTCAGGTTCT GGAAAGCCTC
AAGCGCATGG CCCCGGTGGT GGATCGCCAG AACGCCAACG ACCCGCTGTA TCGCCCGCTG
GCACCCGACT TCGACAGCAA CATCGCCTTC CAGGCGGCGG TCGAACTGGT CATCGAAGGT
ACCCGGCAGC CCAACGGCTA CACCGAGCCG GTATTGCACC GCCGCCGTCG GGAGTTCAAG
GCCATCAACG GCCTGTAA
 
Protein sequence
MTEYVQVGDL QVARVLFDFV QNEATPGTGV DATAFWAGAD KLIHDLAPKN KALLAKRDEL 
QAKIDAWHQS HAGQAHDASA YKAFLQEIGY LLPEAADFQI TTQNVDEEIA TMAGPQLVVP
VMNARFALNA SNARWGSLYD ALYGTDAISE EGGAQKGKGY NKVRGDKVIA FARAFLDQAA
PLSAGSHADS TAYKLIDGKL VVSLKGGSNT GLHDDAQLIG FQGDALAPFA LLLKHNGLHF
ELQIDAASPV GQTDPAGVKD ILMEAALTTI MDCEDSIAAV DADDKVVVYR NWLGLMKGDL
AESVSKGGET FTRTMNPDRV YTTPEGGEVT LHGRSLLFIR NVGHLMTIDA ILDKHGNEVP
EGILDGLLTS LAALHNLKGN TSRSNSRSGS MYIVKPKMHG PQEAAFTNEL FERIEQVLGL
PRNTLKVGIM DEERRTTVNL KACIQAASER VVFINTGFLD RTGDEIHTSM EAGPVVRKAQ
MKAEKWITAY ENSNVDIGLK CGLQGRAQIG KGMWAMPDLM AAMLEQKIAH PLAGANTAWV
PSPTAAALHA LHYHKVDVFA RQAELAQREQ ASVDDILTIA LAPNTDWTPE EIQNELDNNA
QGILGYVVRW IDQGVGCSKV PDINDIGLME DRATLRISSQ HMANWLRHGV VSETQVLESL
KRMAPVVDRQ NANDPLYRPL APDFDSNIAF QAAVELVIEG TRQPNGYTEP VLHRRRREFK
AINGL