Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4688 |
Symbol | |
ID | 3370238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5555991 |
End bp | 5556725 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637655055 |
Product | phosphoribosyltransferase |
Protein accession | YP_237753 |
Protein GI | 66047912 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.482553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTGTC AACCCAGCTA CCCGCACGAG GTTTACATCT GGTTAAAAAA CAAACAATCC TGTTTGTTAT GTGATGAACG CAGTGAGGTG CCCGCGCCCA TCTGCGTGCC CTGCGAAGCA GAGCTGCCGT GGCTGGGCAA CGCTTGCGAG TGCTGTGCGC TGCCGTTACC CCGTTCAGGC ATGAGCTGCG CGCAATGCTG CAAGCAACCG CCCGGCTTTA CCCAGGTCAT CGCGCCCTGG CTGTACGATT TCCCGGTCGA CGGTTTGATC ACCCGCTTCA AACATAACGG TAAATGGCCC ATGGGACGAC TGCTGGCGGA ACTGTGCGCG CACTATCTGC AGCATCGTTT CGAGGAAGAC CTGCCACGTC CCGACTGCCT CATTCCGGTG CCGTTGGCCA ACAAACGCTT GCGCCAGCGC GGCTACAATC AGGCGGCAAT GCTGGCCGGC TGGCTGGGTA AACAGCTGCA ACTGCCTGTC GACGAAGGGC ATGTGTTGCG CAGCCGCGAG ACAACCGCGC AACAGGGCCT GGACGCCAAG GCCCGCAAAC GCAACCTGCG CGGTGCTTTC ACCCTGATTG ATCCCGACTG GGTAAAAGGC CGGCACCTGG CGCTGGTCGA TGACGTTCTG ACCACCGGCT CGACAGCAGA GGTCATTGCA GGTTTATTGA ACACCGCCGG TGCGCGGCGG GTGGATGTGT ATTGCCTGGC GCGAACGCCC AGGCCGGGGG ATTGA
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Protein sequence | MRCQPSYPHE VYIWLKNKQS CLLCDERSEV PAPICVPCEA ELPWLGNACE CCALPLPRSG MSCAQCCKQP PGFTQVIAPW LYDFPVDGLI TRFKHNGKWP MGRLLAELCA HYLQHRFEED LPRPDCLIPV PLANKRLRQR GYNQAAMLAG WLGKQLQLPV DEGHVLRSRE TTAQQGLDAK ARKRNLRGAF TLIDPDWVKG RHLALVDDVL TTGSTAEVIA GLLNTAGARR VDVYCLARTP RPGD
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