Gene Psyr_4688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4688 
Symbol 
ID3370238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5555991 
End bp5556725 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID637655055 
Productphosphoribosyltransferase 
Protein accessionYP_237753 
Protein GI66047912 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.482553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGTC AACCCAGCTA CCCGCACGAG GTTTACATCT GGTTAAAAAA CAAACAATCC 
TGTTTGTTAT GTGATGAACG CAGTGAGGTG CCCGCGCCCA TCTGCGTGCC CTGCGAAGCA
GAGCTGCCGT GGCTGGGCAA CGCTTGCGAG TGCTGTGCGC TGCCGTTACC CCGTTCAGGC
ATGAGCTGCG CGCAATGCTG CAAGCAACCG CCCGGCTTTA CCCAGGTCAT CGCGCCCTGG
CTGTACGATT TCCCGGTCGA CGGTTTGATC ACCCGCTTCA AACATAACGG TAAATGGCCC
ATGGGACGAC TGCTGGCGGA ACTGTGCGCG CACTATCTGC AGCATCGTTT CGAGGAAGAC
CTGCCACGTC CCGACTGCCT CATTCCGGTG CCGTTGGCCA ACAAACGCTT GCGCCAGCGC
GGCTACAATC AGGCGGCAAT GCTGGCCGGC TGGCTGGGTA AACAGCTGCA ACTGCCTGTC
GACGAAGGGC ATGTGTTGCG CAGCCGCGAG ACAACCGCGC AACAGGGCCT GGACGCCAAG
GCCCGCAAAC GCAACCTGCG CGGTGCTTTC ACCCTGATTG ATCCCGACTG GGTAAAAGGC
CGGCACCTGG CGCTGGTCGA TGACGTTCTG ACCACCGGCT CGACAGCAGA GGTCATTGCA
GGTTTATTGA ACACCGCCGG TGCGCGGCGG GTGGATGTGT ATTGCCTGGC GCGAACGCCC
AGGCCGGGGG ATTGA
 
Protein sequence
MRCQPSYPHE VYIWLKNKQS CLLCDERSEV PAPICVPCEA ELPWLGNACE CCALPLPRSG 
MSCAQCCKQP PGFTQVIAPW LYDFPVDGLI TRFKHNGKWP MGRLLAELCA HYLQHRFEED
LPRPDCLIPV PLANKRLRQR GYNQAAMLAG WLGKQLQLPV DEGHVLRSRE TTAQQGLDAK
ARKRNLRGAF TLIDPDWVKG RHLALVDDVL TTGSTAEVIA GLLNTAGARR VDVYCLARTP
RPGD