| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4686 |
|---|
| Symbol | |
|---|
| ID | 3370236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5553587 |
|---|
| End bp | 5554777 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637655053 |
|---|
| Product | 8-amino-7-oxononanoate synthase |
|---|
| Protein accession | YP_237751 |
|---|
| Protein GI | 66047910 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTCG ATCTCCGCAC GCGCCTCGAT GCCCGTCGCG CCGCACACCT CTATCGCCAG
CGCCCGCTGC TGCAAAGCCC GCAAGGCCCG CAGGTCATCG TCGACGGCCA GCCGTTGCTG
GCGTTCTGCA ACAACGATTA CATGGGGCTG GCCAATCATC CCGAAGTGAT CGCTGCCTGG
CAGGCGGGTG CCGAGCGCTG GGGTGTGGGA GGCGGGGCTT CGCATCTGGT GATCGGCCAC
AGCGCACCAC ACCACGAACT GGAAGAGGCG CTGGCCGAGC TGACCGGTCG TCCGCGCGCA
CTGTTGTTCT CCAATGGCTA CATGGCCAAC CTCGGCGCAG TGACCGCGTT GGTCGGGCAG
GGCGATACGG TGCTGGAAGA CCGTCTCAAC CACGCCTCGC TGCTGGATGC CGGTCTGCTC
AGCGGTGCAC GCTTCTCGCG CTATCTGCAC AACGATGTGA GCAGCCTGGA AGCCCGGCTG
GAAAAATCCG TGGGCGATAC CCTGGTAGTG ACAGACGGGG TGTTCAGCAT GGACGGCGAC
ATCGCCGATC TGCCCGCGCT GGCCCGTTCG GCGAAGGCCA AAGGGGCCTG GCTGATGGTG
GATGACGCTC ACGGCTTCGG CCCTTTGGGT GCCAACGGCG CCGGTATCGT CGAGCACTTC
GGCCTGAGCA TGGATGACGT GCCCGTGCTG GTCGGCACCC TGGGCAAGTC GTTCGGCACT
TCCGGGGCGT TCGTGGCCGG CAGTGAAGAA CTGATCGAAA CCCTGATCCA GTTCGCCCGG
CCTTACATTT ACACCACCAG CCAGCCGCCC GCGCTGGCCT GCGCCACCTT GAAAAGTCTG
CAGTTGCTGC GTACCGAGCA TTGGCGTCGC GAGCATCTGA CGCGTCTGAT TCAGCAGTTT
CGTCGCGGTG CCGAGCAGAT CGGGCTGCAA TTGATGGACA GCTTTACCCC GATCCAGCCG
ATCATGATCG GTGATGCCGG TCGGGCGTTG CACCTCTCGC AGTTGCTCCG CGAGCGTGGT
CTGCTGGTCA CCGCCATTCG CCCGCCCACT GTGCCTGCGG GCAGCGCGCG GCTTCGTGTG
ACATTGTCTG CCGCGCACAG CGAAGCCGAC GTGCAGCTAT TATTGAACAC TCTGGAGCAG
TGCTACCCGC TGCTGGATGC CAGCCACTCC TCGGAGCCTG TTCATGCGTG A
|
|---|
| Protein sequence | MSFDLRTRLD ARRAAHLYRQ RPLLQSPQGP QVIVDGQPLL AFCNNDYMGL ANHPEVIAAW
QAGAERWGVG GGASHLVIGH SAPHHELEEA LAELTGRPRA LLFSNGYMAN LGAVTALVGQ
GDTVLEDRLN HASLLDAGLL SGARFSRYLH NDVSSLEARL EKSVGDTLVV TDGVFSMDGD
IADLPALARS AKAKGAWLMV DDAHGFGPLG ANGAGIVEHF GLSMDDVPVL VGTLGKSFGT
SGAFVAGSEE LIETLIQFAR PYIYTTSQPP ALACATLKSL QLLRTEHWRR EHLTRLIQQF
RRGAEQIGLQ LMDSFTPIQP IMIGDAGRAL HLSQLLRERG LLVTAIRPPT VPAGSARLRV
TLSAAHSEAD VQLLLNTLEQ CYPLLDASHS SEPVHA
|
|---|
| |