| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4683 |
|---|
| Symbol | bioD |
|---|
| ID | 3370233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5551356 |
|---|
| End bp | 5552036 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637655050 |
|---|
| Product | dithiobiotin synthetase |
|---|
| Protein accession | YP_237748 |
|---|
| Protein GI | 66047907 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0132] Dethiobiotin synthetase |
|---|
| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.462604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCG CCTACTTCAT CACCGGGACC GATACCGACG CTGGCAAGAC CACGGTGGCT
GCCGGCTTGC TGCATGCCGC CAGAGCGTCT GGCCTGAGCA CGGCAGCCGG CAAGCCCGTT
GCGTCCGGTT GTTTGGTCAC GCCACAGGGG CTGCGCAACC CGGATGCCCT GGCGTTGCTG
GCCGAGTGTT CTGTCGAGCT GGATTATGCT GAAGTCAATC CGCTGGCCTT CGAACCGGCC
ATTGCTCCGC ACCTGGCAGC ACGCGAAGCC GGCGTCGCGC TGACGGTCGA CTCGGTGCTG
CAACCCATGC GGCATATGCT CACCAGACAG GCCGATTTCA CCCTGATCGA AGGGGCAGGC
GGCTGGCGCG TGCCGCTGTC CGGGCAGAGC ACGTTGTCCG ATCTGGCCAT TGCCCTGGAT
CTACCGGTGA TTCTGGTGGT GGGCGTGCGT CTGGGCTGCA TCAATCATGC GGTGCTGACT
GCTGAAGCGA TTGCCCGCGA CGGTTTACGT CTGGCTGGCT GGGTGGCCAA CATCGTGGAT
GCCGACACCT CGCGGCTTGA AGAAAACCTC GCCACGCTGG TCGAGCGTCT GCCCGCACCT
TGTCTGGGGC GGGTGCCGCG ATTGGATGAG GCAAGTGCCG AAAATGTGGC GCAGTATCTT
GATTTGAAGG TGTTGAGCTG A
|
|---|
| Protein sequence | MTAAYFITGT DTDAGKTTVA AGLLHAARAS GLSTAAGKPV ASGCLVTPQG LRNPDALALL
AECSVELDYA EVNPLAFEPA IAPHLAAREA GVALTVDSVL QPMRHMLTRQ ADFTLIEGAG
GWRVPLSGQS TLSDLAIALD LPVILVVGVR LGCINHAVLT AEAIARDGLR LAGWVANIVD
ADTSRLEENL ATLVERLPAP CLGRVPRLDE ASAENVAQYL DLKVLS
|
|---|
| |