| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4675 |
|---|
| Symbol | |
|---|
| ID | 3370225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5540498 |
|---|
| End bp | 5542324 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637655042 |
|---|
| Product | peptidase S9, prolyl oligopeptidase active site region |
|---|
| Protein accession | YP_237740 |
|---|
| Protein GI | 66047899 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.637214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA CTCACGACTC ATCGCAAAAT CCTCCTGACC GCCTGAGCGC CGCCCAGGCG
GTCGCTGCAG GCGTCGACTT CGCCGAACTG GATGTCAGCT CGGCGGGCCT GTTCTGGAAC
GAATACCGCC CCGAAGACGG CGCGAGCCGC ATCTGGCACT GGTACGCCAA CAGCAAGCGC
TGCCTGACGC CACAAGGTTT CAGCGTACGC AGTCGGGTGT ATGAATACGG TGGTGGTTCG
TTCTGCCTCG CCGACGACGC CGTAGTCTTC GTCAACGAGC GCGACCAGCA ACTGTATCGA
CAGGCCCTGG ACGCCAGCGA GCCGGTGGCG CTGACCGAGG GCGACAAGCG CTACGGCGGC
GTGTTCTTCA GCGGCGGCCG GATTCTGGCC GTTGAAGAGG ACCGCAACAC GCATCGACTG
GTGGCTATCG AGCTGGCTGA CGGCAAGCGC CAGTTACTGG CCGAAGGCGC TGATTTTTAC
TCATCGCCAA TTGTCAGTGC CGACGGCAGG CGCCTGGCCT GGATCGAATG GCAGCGCCCG
CATCAGCCGT GGACCAGCAC CCGTTTGATG TGTGCAACGA AACAGGACGA CGGCAACTGG
GCCGCTGCGC AGTGCATCGC AGGTGACGGT GCGCAAGAGT CTCTGCAACA GCCGCGCTTC
GATGCCCATG GGCGTCTGTA TTGCCTGACT GATCGCGCGG GTTTCTGGCA GCCCTGGGGC
GAATCGCCTT CCGGGTTTGC GCCGCTTCCC GCCCGTCCGG CGGATCATGC TTCCGCGCCG
TGGCAAATGG GCAGTTGCAC CTGGCTGCCG ATCAACGATG GTTACCTGGC GAGCTGGTTT
GCAGACGGTT CAAGTGTTCT TGGGCTGTGT CAGGCCAGCG GCAGCGTCGA GGATTTCAGC
GCGGGTTACA GCCGCTTTCG CAGCCTCGCC ATTGACGAAG AGTTCGTCTA TTGCATCGCC
GCCTCGGCCA TCAGCACCTC AGCGGTACTG GCCATTTCTC GCCACGACGC CAGTGTTCAG
GTGCTTGCCG GAGGCGGGTC GCCGCTGCCG GCCGATCAGA TCAGCCGTCC TCAGACGTTG
CGTTACCCCA GTGGCGGGGC CGAGGCTCAT GGCTACTTCT ATCCGGCCAT GACCGGCGCA
GAAAAACCGC CGCTGGTGGT GTTCATCCAT GGCGGCCCGA CCTCTGCGTG CTACCCGGTG
CTGGACCCGC GCATTCAGTA CTGGACGCAC CGCGGCTTCG CCGTCGCAGA CCTCAATTAT
CGCGGCAGCA GCGGCTACGG TCGCGTGTAC CGGCAAGGCC TGCACCTCAC CTGGGGCGTG
GCGGACGTCG AAGATGCCTG TGCAGTCGTG AAACATCTGG CCGAGCGCGG CTTGATCGAC
GAACGACAGG CTTTCATTCG CGGCGGCAGT GCCGGTGGCT ACACCACGCT CTGCGCGTTG
GCCTTCCGCG ACGTATTCCG CGCAGGGGCC AGCCTTTACG GCGTCAGCGA CCCGGTAGCA
CTGGCCAGGG CGACGCATAA ATTCGAGGGT GATTATCTGG ACTGGCTGAT CGGCGATCCC
GACAAGGACA TCGAGCGCTA TCAGGCTCGT ACGCCCCTGC TGCACGCCGA CAGCATCAAA
GTGCCGGTGA TTTTCTTTCA GGGCGAACTG GATGCCGTGG TGGTTCCGGA ACAGACCCGG
TCCATGCTCA AGGCCTTGCA GGACAACGGT ATCAAGACCG AAGCGCACTT CTATGCGGAC
GAGCATCATG GGTTCCGCAA GGCAAACAAC CTGGCAGATG CGCTGGAGAA GGAATGGCGT
TTCTATCGGG ATGTGCTGGA TGCCTGA
|
|---|
| Protein sequence | MTETHDSSQN PPDRLSAAQA VAAGVDFAEL DVSSAGLFWN EYRPEDGASR IWHWYANSKR
CLTPQGFSVR SRVYEYGGGS FCLADDAVVF VNERDQQLYR QALDASEPVA LTEGDKRYGG
VFFSGGRILA VEEDRNTHRL VAIELADGKR QLLAEGADFY SSPIVSADGR RLAWIEWQRP
HQPWTSTRLM CATKQDDGNW AAAQCIAGDG AQESLQQPRF DAHGRLYCLT DRAGFWQPWG
ESPSGFAPLP ARPADHASAP WQMGSCTWLP INDGYLASWF ADGSSVLGLC QASGSVEDFS
AGYSRFRSLA IDEEFVYCIA ASAISTSAVL AISRHDASVQ VLAGGGSPLP ADQISRPQTL
RYPSGGAEAH GYFYPAMTGA EKPPLVVFIH GGPTSACYPV LDPRIQYWTH RGFAVADLNY
RGSSGYGRVY RQGLHLTWGV ADVEDACAVV KHLAERGLID ERQAFIRGGS AGGYTTLCAL
AFRDVFRAGA SLYGVSDPVA LARATHKFEG DYLDWLIGDP DKDIERYQAR TPLLHADSIK
VPVIFFQGEL DAVVVPEQTR SMLKALQDNG IKTEAHFYAD EHHGFRKANN LADALEKEWR
FYRDVLDA
|
|---|
| |