Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4640 |
Symbol | dnaG |
ID | 3370189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5500196 |
End bp | 5502151 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637655009 |
Product | DNA primase |
Protein accession | YP_237708 |
Protein GI | 66047867 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.625681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGC TGATTCCCCA GAGCTTTATC GACGACCTTC TGAACCGCAC CGATATTGTC GATGTTGTCA GTTCGCGCGT GCAGCTCAAG AAAGCCGGGA AGAACTACAC AGCGTGCTGC CCGTTCCACA AAGAGAAAAC ACCCTCTTTC AGCGTCAGCC CGGACAAGCA GTTCTATTAC TGCTTCGGTT GCGGCGCAGG CGGCAACGCG CTCGGCTTCA TCATGGACCA CGACAACCTG GACTTCCCCC AGGCTGTCGA AGACCTGGCC AAGGCCGCCG GCATGGAAGT GCCTCGCGAA CAAAGCGTAA AAGGCCAGAA GCCTCGGCAA CCGACCGATT CCCCGCTCTA CCCGCTGCTG ACCGCCGCCG CCGAGTTCTA TCGCCAGGCC CTGAAAAGCC ACCCGTCACG CAAGGCTGCG GTGGATTACC TCAAGGGCCG CGGGCTGTCC GGCGAAATCG CCAGGGACTT TGGCCTGGGC TTCGCGCCGC CCGGCTGGGA CAATCTGTAC AAGCACCTGA GCAGCGACTC CTTGCAGCAA AAGGTGATGA TCGATGCCGG GCTGCTGATC GAGAACGCCG AAACCGGCAA ACGCTATGAC CGCTTCCGCG ACCGGGTGAT GTTTCCGATC CGTGATTCGC GCGGGCGCGT CATTGCCTTT GGCGGCCGTG TACTGGGCGA TGACAAACCC AAGTACCTGA ACTCCCCGGA AACACCGGTT TTCCACAAGG GCCAGGAGCT GTACGGGCTG TTCGAGGCGC GCAAATTCAA TCGCAACCTC GATGAAATCA TCGTCGTTGA AGGCTACATG GACGTCATCG CCCTGGCCCA GCAAGGCTTG CGCAATGCCG TGGCGACGCT GGGCACTGCG ACCAGCGAAG AGCATTTGAA GCGCCTGTTC AGGGTCGTGC CCAACGTACT GTTCTGCTTC GACGGCGATC AGGCCGGACG TAACGCTGCA TGGCGTGCGC TGGAAGCGAC CCTGTCGAAC CTGCAGGACG GACGCCGGGC GCGCTTTCTG TTTCTTCCCG AAGGCGAAGA TCCGGACACA CTGGTGCGCT CCGAAGGCAC CGACGCGTTC AAGGCACGCA TCAATCAGCA CGCGCAGCCG CTGGCCGATT ATTTTTTCGA GCAACTGACC AAAGAGTCCG ACCCGCGCTC GCTGGAGGGC AAGGCGCACA TGGCCACCCT CGCGGCGCCA TTGATCGACA AAGTGCCCGG CGCGAACCTG CGTATTCTGA TGCGTCAGCG CCTGACCGAA ATTACCGGGC TGACCGGCGA GGCCGTCAGC CATCTGGTGC AGAGCGCGCC GGCAGAGGCG CCACCGAGCT ACGACCCGTA TGTCGACTAC GACGCCATGC CTGATTTTGC CGATTACCAG CCACAAGGCG GTTACGAGCC TCAGCAGGAA TGGACGCAAA AGAAAACCGG CGGTCAGAAT CAAAAAAAAT GGGACAACAA ATCCTGGGGC AAAAAAGGCA AGCGCCAGGA CTTCGAACCT CGAACGCCGC GTGTACCCAC CGCCGTCGAG CCGCCCATGC AGGCCGCACT GAGAACCTTG CTGCATCACC CCGAATTGGC GGAAAAGGTC GAAAATGCCA GCCATTTCGC TGCAGAAGAC CAATCCAACG CACAACTGCT GGTCGCTCTT ATCGAGGCCC GGCAAAAGAA TCCGAACCTT CGGTCGTTAC AGTTGATAGC GCGATGGCAC GGGACTGAAC AGGGCCGCTT GCTGCGCGCA CTGGCAGAAA AGGAATGGCT GATTGAGGCC GATAACCTTG AACAACAGTT TTTCGACACT ATAACTAGCT TATCCGCTCG CCAGCGCGAG CGCAGTCTGG AACATCTGAT CAGCAAGGCT CGGCAGACCG AGCTGAGCGC AGAAGAGAAA ATTCAGCTTA GGGAACTGCT AAATCGCAAT GTTCCCGCAC AAACCCCGAC CTCAACTGGC GCGTGA
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Protein sequence | MAGLIPQSFI DDLLNRTDIV DVVSSRVQLK KAGKNYTACC PFHKEKTPSF SVSPDKQFYY CFGCGAGGNA LGFIMDHDNL DFPQAVEDLA KAAGMEVPRE QSVKGQKPRQ PTDSPLYPLL TAAAEFYRQA LKSHPSRKAA VDYLKGRGLS GEIARDFGLG FAPPGWDNLY KHLSSDSLQQ KVMIDAGLLI ENAETGKRYD RFRDRVMFPI RDSRGRVIAF GGRVLGDDKP KYLNSPETPV FHKGQELYGL FEARKFNRNL DEIIVVEGYM DVIALAQQGL RNAVATLGTA TSEEHLKRLF RVVPNVLFCF DGDQAGRNAA WRALEATLSN LQDGRRARFL FLPEGEDPDT LVRSEGTDAF KARINQHAQP LADYFFEQLT KESDPRSLEG KAHMATLAAP LIDKVPGANL RILMRQRLTE ITGLTGEAVS HLVQSAPAEA PPSYDPYVDY DAMPDFADYQ PQGGYEPQQE WTQKKTGGQN QKKWDNKSWG KKGKRQDFEP RTPRVPTAVE PPMQAALRTL LHHPELAEKV ENASHFAAED QSNAQLLVAL IEARQKNPNL RSLQLIARWH GTEQGRLLRA LAEKEWLIEA DNLEQQFFDT ITSLSARQRE RSLEHLISKA RQTELSAEEK IQLRELLNRN VPAQTPTSTG A
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