Gene Psyr_4640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4640 
SymboldnaG 
ID3370189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5500196 
End bp5502151 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content60% 
IMG OID637655009 
ProductDNA primase 
Protein accessionYP_237708 
Protein GI66047867 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.625681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGGC TGATTCCCCA GAGCTTTATC GACGACCTTC TGAACCGCAC CGATATTGTC 
GATGTTGTCA GTTCGCGCGT GCAGCTCAAG AAAGCCGGGA AGAACTACAC AGCGTGCTGC
CCGTTCCACA AAGAGAAAAC ACCCTCTTTC AGCGTCAGCC CGGACAAGCA GTTCTATTAC
TGCTTCGGTT GCGGCGCAGG CGGCAACGCG CTCGGCTTCA TCATGGACCA CGACAACCTG
GACTTCCCCC AGGCTGTCGA AGACCTGGCC AAGGCCGCCG GCATGGAAGT GCCTCGCGAA
CAAAGCGTAA AAGGCCAGAA GCCTCGGCAA CCGACCGATT CCCCGCTCTA CCCGCTGCTG
ACCGCCGCCG CCGAGTTCTA TCGCCAGGCC CTGAAAAGCC ACCCGTCACG CAAGGCTGCG
GTGGATTACC TCAAGGGCCG CGGGCTGTCC GGCGAAATCG CCAGGGACTT TGGCCTGGGC
TTCGCGCCGC CCGGCTGGGA CAATCTGTAC AAGCACCTGA GCAGCGACTC CTTGCAGCAA
AAGGTGATGA TCGATGCCGG GCTGCTGATC GAGAACGCCG AAACCGGCAA ACGCTATGAC
CGCTTCCGCG ACCGGGTGAT GTTTCCGATC CGTGATTCGC GCGGGCGCGT CATTGCCTTT
GGCGGCCGTG TACTGGGCGA TGACAAACCC AAGTACCTGA ACTCCCCGGA AACACCGGTT
TTCCACAAGG GCCAGGAGCT GTACGGGCTG TTCGAGGCGC GCAAATTCAA TCGCAACCTC
GATGAAATCA TCGTCGTTGA AGGCTACATG GACGTCATCG CCCTGGCCCA GCAAGGCTTG
CGCAATGCCG TGGCGACGCT GGGCACTGCG ACCAGCGAAG AGCATTTGAA GCGCCTGTTC
AGGGTCGTGC CCAACGTACT GTTCTGCTTC GACGGCGATC AGGCCGGACG TAACGCTGCA
TGGCGTGCGC TGGAAGCGAC CCTGTCGAAC CTGCAGGACG GACGCCGGGC GCGCTTTCTG
TTTCTTCCCG AAGGCGAAGA TCCGGACACA CTGGTGCGCT CCGAAGGCAC CGACGCGTTC
AAGGCACGCA TCAATCAGCA CGCGCAGCCG CTGGCCGATT ATTTTTTCGA GCAACTGACC
AAAGAGTCCG ACCCGCGCTC GCTGGAGGGC AAGGCGCACA TGGCCACCCT CGCGGCGCCA
TTGATCGACA AAGTGCCCGG CGCGAACCTG CGTATTCTGA TGCGTCAGCG CCTGACCGAA
ATTACCGGGC TGACCGGCGA GGCCGTCAGC CATCTGGTGC AGAGCGCGCC GGCAGAGGCG
CCACCGAGCT ACGACCCGTA TGTCGACTAC GACGCCATGC CTGATTTTGC CGATTACCAG
CCACAAGGCG GTTACGAGCC TCAGCAGGAA TGGACGCAAA AGAAAACCGG CGGTCAGAAT
CAAAAAAAAT GGGACAACAA ATCCTGGGGC AAAAAAGGCA AGCGCCAGGA CTTCGAACCT
CGAACGCCGC GTGTACCCAC CGCCGTCGAG CCGCCCATGC AGGCCGCACT GAGAACCTTG
CTGCATCACC CCGAATTGGC GGAAAAGGTC GAAAATGCCA GCCATTTCGC TGCAGAAGAC
CAATCCAACG CACAACTGCT GGTCGCTCTT ATCGAGGCCC GGCAAAAGAA TCCGAACCTT
CGGTCGTTAC AGTTGATAGC GCGATGGCAC GGGACTGAAC AGGGCCGCTT GCTGCGCGCA
CTGGCAGAAA AGGAATGGCT GATTGAGGCC GATAACCTTG AACAACAGTT TTTCGACACT
ATAACTAGCT TATCCGCTCG CCAGCGCGAG CGCAGTCTGG AACATCTGAT CAGCAAGGCT
CGGCAGACCG AGCTGAGCGC AGAAGAGAAA ATTCAGCTTA GGGAACTGCT AAATCGCAAT
GTTCCCGCAC AAACCCCGAC CTCAACTGGC GCGTGA
 
Protein sequence
MAGLIPQSFI DDLLNRTDIV DVVSSRVQLK KAGKNYTACC PFHKEKTPSF SVSPDKQFYY 
CFGCGAGGNA LGFIMDHDNL DFPQAVEDLA KAAGMEVPRE QSVKGQKPRQ PTDSPLYPLL
TAAAEFYRQA LKSHPSRKAA VDYLKGRGLS GEIARDFGLG FAPPGWDNLY KHLSSDSLQQ
KVMIDAGLLI ENAETGKRYD RFRDRVMFPI RDSRGRVIAF GGRVLGDDKP KYLNSPETPV
FHKGQELYGL FEARKFNRNL DEIIVVEGYM DVIALAQQGL RNAVATLGTA TSEEHLKRLF
RVVPNVLFCF DGDQAGRNAA WRALEATLSN LQDGRRARFL FLPEGEDPDT LVRSEGTDAF
KARINQHAQP LADYFFEQLT KESDPRSLEG KAHMATLAAP LIDKVPGANL RILMRQRLTE
ITGLTGEAVS HLVQSAPAEA PPSYDPYVDY DAMPDFADYQ PQGGYEPQQE WTQKKTGGQN
QKKWDNKSWG KKGKRQDFEP RTPRVPTAVE PPMQAALRTL LHHPELAEKV ENASHFAAED
QSNAQLLVAL IEARQKNPNL RSLQLIARWH GTEQGRLLRA LAEKEWLIEA DNLEQQFFDT
ITSLSARQRE RSLEHLISKA RQTELSAEEK IQLRELLNRN VPAQTPTSTG A