| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4619 |
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| Symbol | |
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| ID | 3370168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5476726 |
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| End bp | 5478738 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654988 |
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| Product | PAS |
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| Protein accession | YP_237687 |
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| Protein GI | 66047846 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.751025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGTC TTCTGCGCAC CGGTTTTATC GGCTGCCTGG CCTTGCTCTT GATGGCTCAG
ATGGCGAATA CGCAGGCTGA CGAACCTCAA ACACCTGCCG TTGCGCAGTT GAGCGCAGCG
CAACGCAACT GGCTCGACCA GCACGGACCC TTGCGCGTAG GGCTGGTACT GCGCGCGCCT
TACGCGCAGT TCGATCAACG CTTGCAGCAG TTGTCCGGTG CCAACGTCGA CCTGATGAAT
GCGCTGGCGG CGACGCTGCC GGTCGACTTG CTGTGGCGGA ATTTTCCTGA CCAGAGCGCG
TTGGAGAACG CGCTGGCCAA GGGGGAAATC GACGTTGCGC CCGGCTTGAT GCAAACCCCC
GCAGGCCTGC GTCTGTGGTT GTTTTCCGAC CCGTATCTGC GTGTTTCGCA GCTGTTGATC
GGCGAACGTG ATGGCAGCAC TGCCGTGGAC CTGGAGAAAC TCGACAGCCT TTCGCGCGTC
GCGGTACGCA TGCCCAGTAC CACGGCCGAC TACCTGCGCA GCAACTTTGC GCACCTCAAC
CTGCAAGGCG TGCCGCTGGA GCGCCAGGCC TTGCAGCTGT TGCTCAGCCA GCAAGCTCGT
TATGCCGTGG TGGACGAAGC GCAACTCAGT CGTCTGCTGC GCGAGCCGGA GTTCGCCGGG
TTGGCGGTGG TGGGGGATAT CGGGCTGCCG CAATTGTTGC GTGTGGCTTC ACGACGCGAC
ATGCCGGAGC TGGCCGCCAT CGTCAGCGAA GCGTTGCGAG CGATCCCTGC CAAGGAGCTG
GAGCAGTTGC ACGCGCGCTG GATGCCGCTG ACCCCATCCC ATTTCATCGA GTCGACCAAA
CTCTGGAAGA ACCTGTGCAT TCTGCTGCTG GTGATGTTGC TGGCGTGTTT CGCCATCGTG
ATCTGGCAGC GTCGCCAGCA GCAGGCGCTG GAGCAGGAGC TGCTGGCTGC GCGTGAAGAA
CTCGCCCGCC GTGTCGAAGA GGAGGAGGCG CTGCGCCTGG CGCAGTTTTC CATTGATCAA
AGCACCGTCG GCATTCTGTG GGTCAACTGG GACAGCCGCG TGCGTTACGC CAACCGGGCG
GCGGAATCCA TGCTGGGCTA TGCGCCGGGG CAGGTGGTCG AGCGCCCGCT GATCGATTTC
GAGCCCGGTC TGCACATGGA TCGCTGGCTC AACCTGTGGA AGAGCGCGCG TTCCAGCGAA
GACAGCCCGC AAGTGTTCGA GACCCATTGC CTGCGCGCCG ATGGCAGCCT GCTGCCTGTC
GATGTCTCGT TGAGCTTCCT GCGCTTTCGT GACGCTGAAT ACTTGGTGGT GTTTCTCACT
GACGTCAGCG AGCGGCGCCG CGCGCATGAT CTGTTACGTG AGTTGTCAGC GCATCTGGAA
AGCGTGCGTG AAGAAGAGAA GGCGCATATT GCCCGCGAGG TTCACGACGA GTTGGGTCAG
ATGCTGACGG TATTGAAACT CGAGACGTCG ATGTGCGAGC TGGCCTATGC CGACCTCGAC
CCTGGCCTGA GCGAGCGGCT GGACAGCATG AAGCGTCTGA TCGCTCAGTT GTTTCAACTG
GTGCGCGATG TTGCTACGGC CTTGCGGCCA CCGATTCTCG ACGCCGGTAT CGCTTCGGCC
ATCGAATGGC AGGCACGCCG TTTCGAGGCG CGCACGCAGA TCCCGTGCCT GGTGCAGGTG
CCGGACAATC TCCCGGCGCT CAGCGATGCC AGGGCTACGG GCATGTTCCG CATCCTTCAG
GAGGCGCTGA CCAACGTGAT GCGCCATGCC CGCGCGCACA CGGTAGAGAT CAGCCTGACG
CTGCAGGACG GCATGATGTG CATGAGCATC GCCGATGACG GGCAGGGCTT TGTCATCGAG
TCGGGCAGGG CGGTTTCGTT CGGTCTGGTC GGGATGCGCG AGCGGGTGCT GATGCTCGGC
GGCCGACTGG AGCTGGACAG CGAGGTGGGT GAGGGCACAA CCTTGCGCGC CTATATCCCG
CTGGACACCC TCGCACAGGA GCGAAGACAG TGA
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| Protein sequence | MIRLLRTGFI GCLALLLMAQ MANTQADEPQ TPAVAQLSAA QRNWLDQHGP LRVGLVLRAP
YAQFDQRLQQ LSGANVDLMN ALAATLPVDL LWRNFPDQSA LENALAKGEI DVAPGLMQTP
AGLRLWLFSD PYLRVSQLLI GERDGSTAVD LEKLDSLSRV AVRMPSTTAD YLRSNFAHLN
LQGVPLERQA LQLLLSQQAR YAVVDEAQLS RLLREPEFAG LAVVGDIGLP QLLRVASRRD
MPELAAIVSE ALRAIPAKEL EQLHARWMPL TPSHFIESTK LWKNLCILLL VMLLACFAIV
IWQRRQQQAL EQELLAAREE LARRVEEEEA LRLAQFSIDQ STVGILWVNW DSRVRYANRA
AESMLGYAPG QVVERPLIDF EPGLHMDRWL NLWKSARSSE DSPQVFETHC LRADGSLLPV
DVSLSFLRFR DAEYLVVFLT DVSERRRAHD LLRELSAHLE SVREEEKAHI AREVHDELGQ
MLTVLKLETS MCELAYADLD PGLSERLDSM KRLIAQLFQL VRDVATALRP PILDAGIASA
IEWQARRFEA RTQIPCLVQV PDNLPALSDA RATGMFRILQ EALTNVMRHA RAHTVEISLT
LQDGMMCMSI ADDGQGFVIE SGRAVSFGLV GMRERVLMLG GRLELDSEVG EGTTLRAYIP
LDTLAQERRQ
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