Gene Psyr_4617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4617 
Symbol 
ID3370166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5475383 
End bp5475922 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID637654986 
ProductISPsy9, transposase OrfA 
Protein accessionYP_237685 
Protein GI66047844 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.765931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.589726 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAT ATACAGAGCA GGCAAAACTC GCAGCCGTGA AAGAGTATTG TGCCGGCAAG 
GCAGGTTTGA GGGATGTTGC GCGTCGCCAC GATGTGGACT TTTCCTGCCT TCGTCAGTGG
GTCGCGGCTT ATCAGATCCA CGGCCCAGCC GCTCTTAAAG AGAAAAGGCG GCAGCGTTAC
AGTGACGAAT TCAAGCTAGC TGTTTTGAAG CGCATGCATG ATGAGCGATT ATCACTGCGC
CAGACAGCGG CCTTGTTCGA TATCCGTCAG TTCGGCATCA TCAATCTATG GCAGCGCCTT
TTTGACGAAG GTGCTCTTAA CGCATCCTCA AAGCCCCCTA AGAAAGTTGG ACGCCCAAGA
AAGATGACGA CGCCCCTTCC CCCTGTGAAC TCCGCTCCGA TCAACGATGA ATCGCGCTCG
CGTGACGAGT TGCTTGCCGA GGTGAAGCAA CTGCGGATGG AGGTCGATTA TCTAAAAAAG
CTCGATGCCT TGGTTCAGAA GAAGCAACGA ATAGCGCAGC AGAAAAAGCG CAAATCGTGA
 
Protein sequence
MGKYTEQAKL AAVKEYCAGK AGLRDVARRH DVDFSCLRQW VAAYQIHGPA ALKEKRRQRY 
SDEFKLAVLK RMHDERLSLR QTAALFDIRQ FGIINLWQRL FDEGALNASS KPPKKVGRPR
KMTTPLPPVN SAPINDESRS RDELLAEVKQ LRMEVDYLKK LDALVQKKQR IAQQKKRKS