| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4615 |
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| Symbol | |
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| ID | 3370164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5472997 |
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| End bp | 5474121 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637654984 |
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| Product | spermidine/putrescine ABC transporter ATP-binding subunit |
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| Protein accession | YP_237683 |
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| Protein GI | 66047842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.268203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACG TCGATACAAG CGCTGGAGCA AATGATGTTC TGGTCAGCTT TCGTGGTGTG
CAGAAGAGCT ACGACGGCGA AGCACTGATC GTCAAAGACC TCAACCTGGA CATTCGCAAG
GGCGAGTTCC TGACCCTGCT CGGTCCTTCC GGCTCCGGCA AGACCACCAG TCTGATGATG
CTGGCCGGTT TCGAGACCCC GACGGCCGGT GAAATCCTCC TCGGTGGCCG CGCCATCAAC
AACGTGCCAC CGCATAAACG CGACATCGGC ATGGTGTTCC AGAACTACGC CTTGTTTCCG
CACATGACCG TGGCCGAGAA CCTGGCGTTC CCGTTATCGG TGCGTGGCAT GAGCAAGACA
GACGTCGGCG AGAAGGTCAA AAAGGCACTG GGCATGGTCC AGCTCGATAC CTTTGCGCAT
CGCTATCCGG CGCAGCTGTC CGGTGGCCAG CAGCAGCGCG TTGCGCTGGC GCGTGCGCTG
GTCTTCGAAC CGCAACTGGT GCTGATGGAT GAGCCGCTCG GCGCCCTCGA CAAGCAGCTG
CGCGAACACA TGCAGATGGA GATCAAGCAC TTGCACCAGC GCCTGGGTGT GACCGTGGTC
TATGTGACTC ACGACCAGGG CGAAGCGCTG ACCATGTCGG ACCGGGTCGC GGTCTTCCAT
CAGGGCGAGA TCCAGCAGAT CGCGCCGCCC CGCAGCTTGT ACGAAGAACC GAAGAACACC
TTCGTCGCCA ACTTCATCGG CGAGAACAAC CGCCTCAACG GACGTCTGGT CAGTCAGGAC
GGCGACCGCT GTGTGGTCGA GCTGGAGCGT GGCGAAAAAG TCCACGCGCT GGCAATCAAT
GTCGGTCAGC CAGGTGGCCC GGTCACCCTG TCGATCCGTC CCGAGCGCAT CAACCTCAAT
GGCCGCAGCG AGAGCTGCGC CAACCGTTTT TCCGGTCGTG TGGCCGAGTT CATCTATCTG
GGCGACCACG TTCGCGTGCG TCTGGAAGTG GCAGGCAAGC ACGACTTCTT CGTCAAACAG
CCGATTGCCG AACTGGACCC CGGCCTGAGC GTGGGCGACG TGGTGCCCAT CGGCTGGCAA
GTCGAGCACG TCCGAGCGCT CGACCCCTTG CAGCAAGTGC ATTGA
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| Protein sequence | MSDVDTSAGA NDVLVSFRGV QKSYDGEALI VKDLNLDIRK GEFLTLLGPS GSGKTTSLMM
LAGFETPTAG EILLGGRAIN NVPPHKRDIG MVFQNYALFP HMTVAENLAF PLSVRGMSKT
DVGEKVKKAL GMVQLDTFAH RYPAQLSGGQ QQRVALARAL VFEPQLVLMD EPLGALDKQL
REHMQMEIKH LHQRLGVTVV YVTHDQGEAL TMSDRVAVFH QGEIQQIAPP RSLYEEPKNT
FVANFIGENN RLNGRLVSQD GDRCVVELER GEKVHALAIN VGQPGGPVTL SIRPERINLN
GRSESCANRF SGRVAEFIYL GDHVRVRLEV AGKHDFFVKQ PIAELDPGLS VGDVVPIGWQ
VEHVRALDPL QQVH
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