Gene Psyr_4608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4608 
Symbol 
ID3370157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5465472 
End bp5466254 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content55% 
IMG OID637654977 
Productintegrase catalytic subunit 
Protein accessionYP_237676 
Protein GI66047835 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA GCCGGTATTA CGACTATCTG AAGCAGCGGG ATCGAGTTGA TCCCGACAGA 
GAACGGCTCA AGGTCGAGGC GATTCAATTG CACACTCAAA GTCGCCGATC AATGGGAGCT
CGCAGTTTGT CAGCGGCCTT GAAAGCCCGG GGTGAGCAGG TTGGCAGGTT TTTGGCTGGT
CGTCTGATGG CCGAGGCGGG TTTGCAAAGC TGTCAGCGTC GACCGAGGCC TTATCGGCAT
AGCGTCGTGC AATCCCGATT CGCCGAGAAT TTGCTGGAAC GCCAATTTGA AGTATCAGCC
CCCAATCAGG TCTGGTGCGG AGATATAACG TATATCTGGG CTGGTACGCG CTGGGTATAT
CTGGCGGCTG TGCTTGACCT GTACGCCAGG CGGATAGTGG GTTGGGCGAT TTCCAGCACA
CCAGACTCAA CGTTGACTTG CAAGGCGCTG GCATTGGCTC ATGAAGCTCG AGGAAAGCCA
CACAAGGTCA TGTTTCACTC CGACCAAGGC TGCCAGTACA GTAGCGAGAT GTTCCGCACT
AAACTTGAGT CGCTCGGTAT GCAGCAGAGC ATGAGCCGTC GCGGAAACTG CTGGGACAAT
GCCCCGATGG AACGCTTTTT CGGCAGCCTG AAGTCCGAAT GGATACCGAA AAAGGGCTAT
CGGAACGAGG AGGAAGCACG CCCTGATGTG CTTCGTTACG TAATCCATCA CTACAATCAG
GTCAGGCTGC ACAGCTACAA CGAATACCGC ACGCCAGTGG ATCAGGAAAA AATGGCGGCG
TAG
 
Protein sequence
MNRSRYYDYL KQRDRVDPDR ERLKVEAIQL HTQSRRSMGA RSLSAALKAR GEQVGRFLAG 
RLMAEAGLQS CQRRPRPYRH SVVQSRFAEN LLERQFEVSA PNQVWCGDIT YIWAGTRWVY
LAAVLDLYAR RIVGWAISST PDSTLTCKAL ALAHEARGKP HKVMFHSDQG CQYSSEMFRT
KLESLGMQQS MSRRGNCWDN APMERFFGSL KSEWIPKKGY RNEEEARPDV LRYVIHHYNQ
VRLHSYNEYR TPVDQEKMAA