Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4608 |
Symbol | |
ID | 3370157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5465472 |
End bp | 5466254 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637654977 |
Product | integrase catalytic subunit |
Protein accession | YP_237676 |
Protein GI | 66047835 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA GCCGGTATTA CGACTATCTG AAGCAGCGGG ATCGAGTTGA TCCCGACAGA GAACGGCTCA AGGTCGAGGC GATTCAATTG CACACTCAAA GTCGCCGATC AATGGGAGCT CGCAGTTTGT CAGCGGCCTT GAAAGCCCGG GGTGAGCAGG TTGGCAGGTT TTTGGCTGGT CGTCTGATGG CCGAGGCGGG TTTGCAAAGC TGTCAGCGTC GACCGAGGCC TTATCGGCAT AGCGTCGTGC AATCCCGATT CGCCGAGAAT TTGCTGGAAC GCCAATTTGA AGTATCAGCC CCCAATCAGG TCTGGTGCGG AGATATAACG TATATCTGGG CTGGTACGCG CTGGGTATAT CTGGCGGCTG TGCTTGACCT GTACGCCAGG CGGATAGTGG GTTGGGCGAT TTCCAGCACA CCAGACTCAA CGTTGACTTG CAAGGCGCTG GCATTGGCTC ATGAAGCTCG AGGAAAGCCA CACAAGGTCA TGTTTCACTC CGACCAAGGC TGCCAGTACA GTAGCGAGAT GTTCCGCACT AAACTTGAGT CGCTCGGTAT GCAGCAGAGC ATGAGCCGTC GCGGAAACTG CTGGGACAAT GCCCCGATGG AACGCTTTTT CGGCAGCCTG AAGTCCGAAT GGATACCGAA AAAGGGCTAT CGGAACGAGG AGGAAGCACG CCCTGATGTG CTTCGTTACG TAATCCATCA CTACAATCAG GTCAGGCTGC ACAGCTACAA CGAATACCGC ACGCCAGTGG ATCAGGAAAA AATGGCGGCG TAG
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Protein sequence | MNRSRYYDYL KQRDRVDPDR ERLKVEAIQL HTQSRRSMGA RSLSAALKAR GEQVGRFLAG RLMAEAGLQS CQRRPRPYRH SVVQSRFAEN LLERQFEVSA PNQVWCGDIT YIWAGTRWVY LAAVLDLYAR RIVGWAISST PDSTLTCKAL ALAHEARGKP HKVMFHSDQG CQYSSEMFRT KLESLGMQQS MSRRGNCWDN APMERFFGSL KSEWIPKKGY RNEEEARPDV LRYVIHHYNQ VRLHSYNEYR TPVDQEKMAA
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