Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4600 |
Symbol | |
ID | 3370149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5458494 |
End bp | 5459666 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637654969 |
Product | glycoside hydrolase family protein |
Protein accession | YP_237668 |
Protein GI | 66047827 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATA GCAGTTCTGC TGTCAGCCAG CTGAAGAATA TTCCGCTGGT AGGTATCAAC CTGGGTTCGG TGGCGAACGC CGGACAGATC GTGCCGGGCG AGGCCGGGAC TCATTACCAG TGGCCCAATC GTGGAACCGT CACGACCTGG GTCAAGAACC GGGGCGTGCG TCTGATCCGG TTCCCGTTCG AACTTCAGCG CGCCATTCAG CTGTCGACTC TGGACGGTCT GCCAGGCCAA GGGGCGAACC TGAACACCGA TTTTGTGAAG CGCTGGAAAG AAATGCTTGG CTGGATTCGC GATGACTCCA ACGGCGAGGC CAGAATCATT CCTGATCCGC ACCACTACAT GCGGTTGCAT CGCTACGAAA CAGATGCAAA CGGGACGCTG ACCGGACGCA TTCTTCCTGC CGCAGAGGCG GGTAATCAGA ATGGCTGGAA GGCAACCGAA TCGGTATTGA TCAAGGACGG GAACGGTGTC AACGGCACTT TCTGGAGCGC CGTTCACCTG GCCAACTTCC ACCAGAAGCT GGTCACTGAA TGCGACGATC CGATGGTGCT GGGCTGGGGG TTGGGTAACG AGCCGTATTC GAATACCACG GCAGGTGCCA AAGACTACAT TACGTTGCCT GATCTTGAAG CGCTGTACAT CAGCACGATG AATACCGTGC TGCAGGCGTT GCGCAACAGC TCGAAAAAGC CGGTGTTCAT TTGTGGGCTG GAGTTTGCAA GCGCCAGAAA CTGGGCCACC GTCTCTGCCA ACCTTCAGTC GAAGATTGTC GATCCGGCCA ATGCAATCGT CTGGGAAGCC CACGCTTACG GCGATTACGA TAAAAGCTCC AGCGGTGCCT ACGCCAATAA CAACGATTTG ATCTCGCCGA CCGTTCTGCG CGATGAAATC GTGGGTCCGT TTCTGACCTA TGCCAAGACT AACAAGATGG CCGCATTTAT CGGTGAAACA GGGATTCCGC CAACGGCTGC CGGTCGCACC GCGCTGAAAA ACCTGCTCGA TAAAGCGAAG GCAGAAATGG TGCCAGTGAC GCTGTGGGTC ACAGGACCAG GCACCGATGG CGAAAAGATG AGCCTGGAAG CCAGCAACCA GGCGCAGACC GTCGCACTGG TCACACCGTA CTTTGCCGAG CGCATTGCCC TGTGGGGTTA TGCACAGGCA TGA
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Protein sequence | MSNSSSAVSQ LKNIPLVGIN LGSVANAGQI VPGEAGTHYQ WPNRGTVTTW VKNRGVRLIR FPFELQRAIQ LSTLDGLPGQ GANLNTDFVK RWKEMLGWIR DDSNGEARII PDPHHYMRLH RYETDANGTL TGRILPAAEA GNQNGWKATE SVLIKDGNGV NGTFWSAVHL ANFHQKLVTE CDDPMVLGWG LGNEPYSNTT AGAKDYITLP DLEALYISTM NTVLQALRNS SKKPVFICGL EFASARNWAT VSANLQSKIV DPANAIVWEA HAYGDYDKSS SGAYANNNDL ISPTVLRDEI VGPFLTYAKT NKMAAFIGET GIPPTAAGRT ALKNLLDKAK AEMVPVTLWV TGPGTDGEKM SLEASNQAQT VALVTPYFAE RIALWGYAQA
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