Gene Psyr_4600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4600 
Symbol 
ID3370149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5458494 
End bp5459666 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content57% 
IMG OID637654969 
Productglycoside hydrolase family protein 
Protein accessionYP_237668 
Protein GI66047827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATA GCAGTTCTGC TGTCAGCCAG CTGAAGAATA TTCCGCTGGT AGGTATCAAC 
CTGGGTTCGG TGGCGAACGC CGGACAGATC GTGCCGGGCG AGGCCGGGAC TCATTACCAG
TGGCCCAATC GTGGAACCGT CACGACCTGG GTCAAGAACC GGGGCGTGCG TCTGATCCGG
TTCCCGTTCG AACTTCAGCG CGCCATTCAG CTGTCGACTC TGGACGGTCT GCCAGGCCAA
GGGGCGAACC TGAACACCGA TTTTGTGAAG CGCTGGAAAG AAATGCTTGG CTGGATTCGC
GATGACTCCA ACGGCGAGGC CAGAATCATT CCTGATCCGC ACCACTACAT GCGGTTGCAT
CGCTACGAAA CAGATGCAAA CGGGACGCTG ACCGGACGCA TTCTTCCTGC CGCAGAGGCG
GGTAATCAGA ATGGCTGGAA GGCAACCGAA TCGGTATTGA TCAAGGACGG GAACGGTGTC
AACGGCACTT TCTGGAGCGC CGTTCACCTG GCCAACTTCC ACCAGAAGCT GGTCACTGAA
TGCGACGATC CGATGGTGCT GGGCTGGGGG TTGGGTAACG AGCCGTATTC GAATACCACG
GCAGGTGCCA AAGACTACAT TACGTTGCCT GATCTTGAAG CGCTGTACAT CAGCACGATG
AATACCGTGC TGCAGGCGTT GCGCAACAGC TCGAAAAAGC CGGTGTTCAT TTGTGGGCTG
GAGTTTGCAA GCGCCAGAAA CTGGGCCACC GTCTCTGCCA ACCTTCAGTC GAAGATTGTC
GATCCGGCCA ATGCAATCGT CTGGGAAGCC CACGCTTACG GCGATTACGA TAAAAGCTCC
AGCGGTGCCT ACGCCAATAA CAACGATTTG ATCTCGCCGA CCGTTCTGCG CGATGAAATC
GTGGGTCCGT TTCTGACCTA TGCCAAGACT AACAAGATGG CCGCATTTAT CGGTGAAACA
GGGATTCCGC CAACGGCTGC CGGTCGCACC GCGCTGAAAA ACCTGCTCGA TAAAGCGAAG
GCAGAAATGG TGCCAGTGAC GCTGTGGGTC ACAGGACCAG GCACCGATGG CGAAAAGATG
AGCCTGGAAG CCAGCAACCA GGCGCAGACC GTCGCACTGG TCACACCGTA CTTTGCCGAG
CGCATTGCCC TGTGGGGTTA TGCACAGGCA TGA
 
Protein sequence
MSNSSSAVSQ LKNIPLVGIN LGSVANAGQI VPGEAGTHYQ WPNRGTVTTW VKNRGVRLIR 
FPFELQRAIQ LSTLDGLPGQ GANLNTDFVK RWKEMLGWIR DDSNGEARII PDPHHYMRLH
RYETDANGTL TGRILPAAEA GNQNGWKATE SVLIKDGNGV NGTFWSAVHL ANFHQKLVTE
CDDPMVLGWG LGNEPYSNTT AGAKDYITLP DLEALYISTM NTVLQALRNS SKKPVFICGL
EFASARNWAT VSANLQSKIV DPANAIVWEA HAYGDYDKSS SGAYANNNDL ISPTVLRDEI
VGPFLTYAKT NKMAAFIGET GIPPTAAGRT ALKNLLDKAK AEMVPVTLWV TGPGTDGEKM
SLEASNQAQT VALVTPYFAE RIALWGYAQA