Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4587 |
Symbol | |
ID | 3370136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5447862 |
End bp | 5448902 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654956 |
Product | baseplate J-like protein |
Protein accession | YP_237655 |
Protein GI | 66047814 |
COG category | [S] Function unknown |
COG ID | [COG3299] Uncharacterized homolog of phage Mu protein gp47 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTTTG AAACACCTAC GTTACCGGCG CTGATCAACC GAACCCAGGT CGACCTTGCC GACGAAGCGC TGCGTCAGTC CGATGCCCGG GTATTGTCCC GCGCGCACAG CGGTGCGGCC TACGGGCTGT ACGGCTATCA GGACTGGATC GCCGACCAGA TTCTGCCGGA CACCGCCGAC GAGGAGACCC TCGAGCGGCA AGCCATCCTG CGCCTGAGGC AACCGCGCAA GGTGGCACAG GCCGCTACTG GCACGGTGCG CTTCAGCGCT GCAGCCGGCG CGGTGCTGGA TGCGGACACT GTGCTGCAGT TCAGTGATGG ACGCTTCTAC CGCGTCACCA AAGGCGTCAC CACGGTTGCG GGCAATAACA CAACCACGGT CGAAGCGGTG GATGCCGGTG TTCTGGGTAA TGCGGACGCC GGTCTGGTGA TGACTGCCGT GCAACCGGTC GAAGGCATCG ACAGCACCTT CACCGTCATT GCCGATGGAC TGTCCGGCGG TATCTCGCAG GAAAGTATCG AGTCCTTGCG TGCGCGTGTC GTGCGCTCCT ACCGGGTCAT CCCGCATGGC GGCAATCAGG ATGATTACGT GACCTGGGCG CTGGAAGTAC CGGGCGTGAC GCGTGCCTGG TGTGTGCGCC GGTTCATGGG GCCAGGGACG GTGGCGGTGT TCTTCATGCG TGACGACCAG GCCGATCCCA TTCCTGACGC TGAACAGCTC GCTGCGGTCG CGGCGTATAT CGAGCCGCTG CGTCCGGTTA CGGCGGATGT GTATGTGCTG GCGCCGGTGC AGAAACCGGT GGTCTACACG ATCCGGCTCA CACCGGACAC CTCCGCCGTG CGGGCGGCGG TCGAGGCGCA GCTGCTGGAC CTGCACAACC GTGAGGGCGG GCTGGGCGAA ACCCTGTTGC TCACGCACAT CGCCGAGGCT ATCAGTCGCG CGACGGGCGA AACCGATCAT GTGCTGGTTT CGCCAGTGGC CAACGTTACT GCGGCGGCCA ACCAGCTGCT CACGTTCGGG GGTATTCAAT GGTCGTCATA A
|
Protein sequence | MPFETPTLPA LINRTQVDLA DEALRQSDAR VLSRAHSGAA YGLYGYQDWI ADQILPDTAD EETLERQAIL RLRQPRKVAQ AATGTVRFSA AAGAVLDADT VLQFSDGRFY RVTKGVTTVA GNNTTTVEAV DAGVLGNADA GLVMTAVQPV EGIDSTFTVI ADGLSGGISQ ESIESLRARV VRSYRVIPHG GNQDDYVTWA LEVPGVTRAW CVRRFMGPGT VAVFFMRDDQ ADPIPDAEQL AAVAAYIEPL RPVTADVYVL APVQKPVVYT IRLTPDTSAV RAAVEAQLLD LHNREGGLGE TLLLTHIAEA ISRATGETDH VLVSPVANVT AAANQLLTFG GIQWSS
|
| |