Gene Psyr_4587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4587 
Symbol 
ID3370136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5447862 
End bp5448902 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content64% 
IMG OID637654956 
Productbaseplate J-like protein 
Protein accessionYP_237655 
Protein GI66047814 
COG category[S] Function unknown 
COG ID[COG3299] Uncharacterized homolog of phage Mu protein gp47 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTTG AAACACCTAC GTTACCGGCG CTGATCAACC GAACCCAGGT CGACCTTGCC 
GACGAAGCGC TGCGTCAGTC CGATGCCCGG GTATTGTCCC GCGCGCACAG CGGTGCGGCC
TACGGGCTGT ACGGCTATCA GGACTGGATC GCCGACCAGA TTCTGCCGGA CACCGCCGAC
GAGGAGACCC TCGAGCGGCA AGCCATCCTG CGCCTGAGGC AACCGCGCAA GGTGGCACAG
GCCGCTACTG GCACGGTGCG CTTCAGCGCT GCAGCCGGCG CGGTGCTGGA TGCGGACACT
GTGCTGCAGT TCAGTGATGG ACGCTTCTAC CGCGTCACCA AAGGCGTCAC CACGGTTGCG
GGCAATAACA CAACCACGGT CGAAGCGGTG GATGCCGGTG TTCTGGGTAA TGCGGACGCC
GGTCTGGTGA TGACTGCCGT GCAACCGGTC GAAGGCATCG ACAGCACCTT CACCGTCATT
GCCGATGGAC TGTCCGGCGG TATCTCGCAG GAAAGTATCG AGTCCTTGCG TGCGCGTGTC
GTGCGCTCCT ACCGGGTCAT CCCGCATGGC GGCAATCAGG ATGATTACGT GACCTGGGCG
CTGGAAGTAC CGGGCGTGAC GCGTGCCTGG TGTGTGCGCC GGTTCATGGG GCCAGGGACG
GTGGCGGTGT TCTTCATGCG TGACGACCAG GCCGATCCCA TTCCTGACGC TGAACAGCTC
GCTGCGGTCG CGGCGTATAT CGAGCCGCTG CGTCCGGTTA CGGCGGATGT GTATGTGCTG
GCGCCGGTGC AGAAACCGGT GGTCTACACG ATCCGGCTCA CACCGGACAC CTCCGCCGTG
CGGGCGGCGG TCGAGGCGCA GCTGCTGGAC CTGCACAACC GTGAGGGCGG GCTGGGCGAA
ACCCTGTTGC TCACGCACAT CGCCGAGGCT ATCAGTCGCG CGACGGGCGA AACCGATCAT
GTGCTGGTTT CGCCAGTGGC CAACGTTACT GCGGCGGCCA ACCAGCTGCT CACGTTCGGG
GGTATTCAAT GGTCGTCATA A
 
Protein sequence
MPFETPTLPA LINRTQVDLA DEALRQSDAR VLSRAHSGAA YGLYGYQDWI ADQILPDTAD 
EETLERQAIL RLRQPRKVAQ AATGTVRFSA AAGAVLDADT VLQFSDGRFY RVTKGVTTVA
GNNTTTVEAV DAGVLGNADA GLVMTAVQPV EGIDSTFTVI ADGLSGGISQ ESIESLRARV
VRSYRVIPHG GNQDDYVTWA LEVPGVTRAW CVRRFMGPGT VAVFFMRDDQ ADPIPDAEQL
AAVAAYIEPL RPVTADVYVL APVQKPVVYT IRLTPDTSAV RAAVEAQLLD LHNREGGLGE
TLLLTHIAEA ISRATGETDH VLVSPVANVT AAANQLLTFG GIQWSS