Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4583 |
Symbol | |
ID | 3370132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5444570 |
End bp | 5445115 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654952 |
Product | glycoside hydrolase family protein |
Protein accession | YP_237651 |
Protein GI | 66047810 |
COG category | [R] General function prediction only |
COG ID | [COG3179] Predicted chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0192783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGATAA CCGTAAAACA ACTACTGCAA ATCCTCCCCA ACGCCGGCCC TAAAGCCGGC GTTTTCGTTC CTGCTCTCAA CATCGCCATG GCCCGTTACG CCATCGACAC CCGCCTGCGT ATCGCCGCGT TCATTGCTCA GATAGGGCAT GAGTCCGGGC AGCTTCGTTA TGTGCGTGAG CTAGGCAGTG ACAGCTACCT GGCGAAGTAC GACACGGGCC AGTTGGCGCT GCGTCTGGGC AACACGCCAG AGGCAGATGG CGATGGCCAG CTGTATCGGG GCCGTGGGCT GATTCAGGTG ACGGGGCGGA CCAACTACGA GGCGTGCGGG GAGGCGCTCG GGCTGGACTT GCTTGCCCAG CCGCAACTGC TCGAACAACC CGACCACGCG GCCATGTCGG CGGCGTGGTT CTGGGATCGG GCCAACCTCA ATGCGCTGGC AGACCAGGCT GATTTTCTGA TGATCACCCG CCGCATCAAT GGCGGTACCA ACGGCCTGGC GGATCGGCAG GCGCTTTACC AGCGGGCATT GGAGGTGCTG CCGTGA
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Protein sequence | MLITVKQLLQ ILPNAGPKAG VFVPALNIAM ARYAIDTRLR IAAFIAQIGH ESGQLRYVRE LGSDSYLAKY DTGQLALRLG NTPEADGDGQ LYRGRGLIQV TGRTNYEACG EALGLDLLAQ PQLLEQPDHA AMSAAWFWDR ANLNALADQA DFLMITRRIN GGTNGLADRQ ALYQRALEVL P
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