Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4571 |
Symbol | |
ID | 3370120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5435070 |
End bp | 5435984 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654940 |
Product | hypothetical protein |
Protein accession | YP_237639 |
Protein GI | 66047798 |
COG category | [S] Function unknown |
COG ID | [COG3152] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATT CACACTTCAA GATTGTATTT GAAGGGCAGG TGCGTGAGGG CGTCGAGCTC GACACCGCAA AGGCCAACCT GGCGGGGCTG TTCAAAAGCG AACCGTCTGC AGTGCAGAAG CTGTTCAGCG GTCAACCCGT CGCGCTCAAG CGCGGGATCA CTTATCAGGA TGCGGAACGC TACCTGAAGG TGCTGGACGA TGCGGGCGTC GAAGCACGTA TCGAACCTGA TATTGAAATC AGCCTGAGTC TGGATGAAGT CGTCAGCCAG CCCTCCCCCA AACCCGCGCA TCTGGAAATA TCGCCCTACG CACCGCCCAA GGCACAGGTC GGCGCTGATC AGCCCGGTCA TTCGACGCTG AAGGTCTTGA GTATCCATGG GCGTATCGGG CGCTTGCGCT ATCTGGCGTG GAGCATGGTC CTGAGTGCCG CGACGCTGGT GCTGGTAGGT GTGTGCCTGC TGGTCATGAA CGGTTCGCTG GTCGCCGGCG GCCTGCTGAT GGCGGTGGTG CTCGTCGTGT TCGCTGTCAT AGGTGCGCAG ATCGGCGTTC AGCGGCTGCA CGATCTGGGT TGGTCGGGCT GGCTTCTGCT GCTGACCATG GTGCCGTTCG TAGGCAGCGT CTTCCCGTTT CTGATGATCC TGCTGCCTGG AACGAAAGGC CCCAACGCTT TCGGCCCGCC GCCGCCACCG AATTCCCGAG GCGTGAAGAC CCTGGCCATT CTGTGGGTGT TACTGATCCC GATTGTCCTG ATCGGACTCA CCGCCGGCGG CGCAGGCATG CTGCGTGATG AGCTGGAATT GCAGACCGAC GAATACGAGC AATCGCTCCC TTACGACGAC GAAGAAAGCC GTGACAGTGC CTTGACCGCG CCAGCGGATG TCAACATAGA GCCCGAAGAA CAAAGCGACA AGTAA
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Protein sequence | MADSHFKIVF EGQVREGVEL DTAKANLAGL FKSEPSAVQK LFSGQPVALK RGITYQDAER YLKVLDDAGV EARIEPDIEI SLSLDEVVSQ PSPKPAHLEI SPYAPPKAQV GADQPGHSTL KVLSIHGRIG RLRYLAWSMV LSAATLVLVG VCLLVMNGSL VAGGLLMAVV LVVFAVIGAQ IGVQRLHDLG WSGWLLLLTM VPFVGSVFPF LMILLPGTKG PNAFGPPPPP NSRGVKTLAI LWVLLIPIVL IGLTAGGAGM LRDELELQTD EYEQSLPYDD EESRDSALTA PADVNIEPEE QSDK
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