Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4560 |
Symbol | nusG |
ID | 3370100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5419117 |
End bp | 5419650 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637654920 |
Product | transcription antitermination protein NusG |
Protein accession | YP_237628 |
Protein GI | 66047787 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000238123 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.475852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTAAGC GTTGGTACGT AGTGCATGCT TACTCGGGTT ACGAGAAGCA TGTCATGCGC TCGTTGGTCG AGCGTGTGAA GCTGGCAGGC ATGGAAGATG GCTTCGGCGA AATTCTGGTT CCCACTGAAG AAGTGGTTGA AATGCGTAAT GGCCAGAAGC GCAAAAGCGA ACGCAAGTTC TTCCCTGGTT ATGTGCTTGT TCAGATGGAC ATGAATGAGG GTACTTGGCA CTTGGTCAAG GATACCCCGC GTGTCATGGG CTTCATCGGC GGTACCGCTG ACAAGCCCGC CCCCATCACT GATAAAGAGG CAGAAGCGAT TCTGCGTCGC GTTGCTGACG GTAGCGACAA GCCGAAGCCG AAAACGCTGT TCGAGCCAGG TGAAGTTGTT CGCGTCACCG ACGGCCCGTT CGCCGATTTC AATGGCACGG TCGAAGAAGT TAACTACGAA AAGAGCCGGA TTCAAGTGGC GGTGCTCATT TTCGGACGCT CTACTCCGGT AGAGCTGGAG TTCAGTCAGG TCGAAAAGGC ATAA
|
Protein sequence | MAKRWYVVHA YSGYEKHVMR SLVERVKLAG MEDGFGEILV PTEEVVEMRN GQKRKSERKF FPGYVLVQMD MNEGTWHLVK DTPRVMGFIG GTADKPAPIT DKEAEAILRR VADGSDKPKP KTLFEPGEVV RVTDGPFADF NGTVEEVNYE KSRIQVAVLI FGRSTPVELE FSQVEKA
|
| |