Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4550 |
Symbol | tuf |
ID | 3370090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5403640 |
End bp | 5404833 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637654910 |
Product | elongation factor Tu |
Protein accession | YP_237618 |
Protein GI | 66047777 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0141185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.074494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAAG AAAAATTTGA TCGTTCCCTC CCGCACGTCA ACGTTGGCAC CATTGGTCAC GTTGACCATG GTAAAACCAC GCTGACCGCT GCTCTGACTC GCGTCTGCTC CGAAGTTTTC GGTTCGGCTG CTGTTGAATT CGACAAGATC GACAGCGCAC CGGAAGAAAA GGCTCGTGGT ATTACCATCA ACACCGCGCA CGTCGAATAC AAATCGTTGA TCCGTCACTA TGCTCACGTT GACTGCCCAG GTCACGCTGA CTACGTGAAG AACATGATCA CTGGTGCTGC CCAGATGGAC GGCGCGATTC TGGTTTGTTC GGCCGCTGAT GGTCCGATGC CACAAACCCG TGAGCACATC CTGCTGTCCC GTCAGGTTGG CGTTCCGTAC ATCGTGGTCT TCCTGAACAA GGCTGACCTG GTAGACGACG CTGAGCTGCT GGAACTGGTC GAGATGGAAG TGCGCGATCT GCTGAGCACT TACGACTTCC CAGGCGACGA CACTCCGATC ATCATCGGTT CTGCTCGTAT GGCTCTGGAA GGTAAAGACG ACAACGAAAT GGGCACCACT GCCGTTCGTA AACTGGTTGA AACACTGGAC TCCTACATCC CAGAACCAGT TCGTGTTACC GACAAGCCGT TCCTGATGCC GATCGAAGAC GTATTCTCGA TCTCCGGTCG CGGTACTGTT GTGACTGGTC GTATTGAGCG CGGTATCGTC AAGGTTCAGG ATCCACTGGA AATCGTTGGT CTGCGTGACA CTACCGTCAC CACCTGCACC GGTGTTGAAA TGTTCCGCAA ACTGCTCGAC GAAGGTCGTG CTGGCGAGAA CTGCGGCGTT CTGCTGCGCG GTACCAAGCG TGACGACGTT GAGCGTGGCC AGGTTCTGGT CAAGCCAGGC AGCGTCAAGC CGCACACTCA GTTCGAAGCT GAAATCTACG TTCTGAGCAA AGAAGAAGGC GGTCGTCACA CTCCGTTCTT CAAAGGCTAC CGTCCACAGT TCTACTTCCG TACTACCGAC GTAACTGGTA GCTGCGAACT GCCGGAAGGC GTAGAAATGG TTATGCCAGG TGATAACGTT AAAGTTTCCG TTACCCTGAT CAAGCCAATC GCAATGGAAG ATGGTCTGCG TTTCGCAATC CGTGAAGGCG GTCGTACCGT CGGCGCTGGC GTCGTAGCCA AAATCATCGC TTAA
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Protein sequence | MAKEKFDRSL PHVNVGTIGH VDHGKTTLTA ALTRVCSEVF GSAAVEFDKI DSAPEEKARG ITINTAHVEY KSLIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLSRQVGVPY IVVFLNKADL VDDAELLELV EMEVRDLLST YDFPGDDTPI IIGSARMALE GKDDNEMGTT AVRKLVETLD SYIPEPVRVT DKPFLMPIED VFSISGRGTV VTGRIERGIV KVQDPLEIVG LRDTTVTTCT GVEMFRKLLD EGRAGENCGV LLRGTKRDDV ERGQVLVKPG SVKPHTQFEA EIYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGSCELPEG VEMVMPGDNV KVSVTLIKPI AMEDGLRFAI REGGRTVGAG VVAKIIA
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