| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4542 |
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| Symbol | rpsC |
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| ID | 3370082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5399382 |
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| End bp | 5400068 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637654902 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_237610 |
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| Protein GI | 66047769 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0688366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCAGA AAGTACATCC CATTGGCATT CGCCTGGGAA TCGTCAAGGA GCACACCTCC
GTCTGGTACG CAGACGGTCG GACTTATGCG GACTATTTGT TCGCTGATCT GAAAGTGCGT
GAGTACCTCC AAGACAAATT AAAAAGCGCG TCCGTCAGCC GTATCGATAT CCATCGTCCG
GCTCAGACAG CACGTATCAC CATCCACACC GCTCGTCCAG GTATCGTTAT CGGGAAGAAA
GGTGAAGATG TTGAGAAACT GCGTCAGGAC CTGACCAAGC AAATGGGTGT GCCTGTGCAC
ATCAATATCG AAGAGATCCG TAAGCCGGAG CTCGACGGTA TGCTGGTTGC GCAGAGCGTA
GCTCAGCAGC TGGAGCGTCG CGTAATGTTC CGTCGCGCTA TGAAGCGCGC TGTTCAGAAC
GCCATGCGCA TTGGTGCCAA AGGCATCAAA ATCCAAGTGA GCGGTCGTCT CGGCGGTGCT
GAAATCGCAC GTACTGAATG GTATCGCGAA GGTCGTGTGC CACTGCACAC CCTGCGTGCC
GACATCGACT ATGCCAACTA CGAAGCTCAC ACCACTTACG GTGTGATCGG TGTAAAGGTT
TGGATCTTCA AAGGCGAAGT AATTGGTGGT CGCCAAGAAG AACTGAAACC ACAAGCACCA
GCGCCTCGTA AAAAAGCTGC TAAGTAA
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| Protein sequence | MGQKVHPIGI RLGIVKEHTS VWYADGRTYA DYLFADLKVR EYLQDKLKSA SVSRIDIHRP
AQTARITIHT ARPGIVIGKK GEDVEKLRQD LTKQMGVPVH INIEEIRKPE LDGMLVAQSV
AQQLERRVMF RRAMKRAVQN AMRIGAKGIK IQVSGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYANYEAH TTYGVIGVKV WIFKGEVIGG RQEELKPQAP APRKKAAK
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